Query= MSMg01no308_p08.b1 MSMg01no308_p08.b1 CHROMAT_FILE:
MSMg01no308_p08.b1 PHD_FILE: MSMg01no308_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:25 2005
(638 letters)
>mm_chrX_135539217_135540253
Length = 1037
Score = 1151 bits (595), Expect = 0.0
Identities = 625/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaattctaccgagaccaaacaagggtcggggatgtggccaagtgatacagtgtt 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 ggaattcaattctaaagagaccaaacaagggtcggggatgtggccaagtgatacagtgtt 903
Query: 64 tgcctagtatgtccgagtccatgactagcattctcccaacacccgaccaaagaaaaaaga 123
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 tgcctagcatgtgtgagtccatgactagcattctcccaacacccgaccaaagaaaaaagg 843
Query: 124 aaaaatcccttaacatttctggttcccacatcttgttaggtgacagagccagagctgcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aaaaatcccttaacatttctggttcccacatcttgttaggtgacagagccagagctgcaa 783
Query: 184 tccaaagctctctgacctcaaaccctgcttctacactttacatccccgaaatggcacata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tccaaagctctctgacctcaaaccctgcttctacactttacatccccgaaatggcacata 723
Query: 244 ttttgttaacattcgacaactttgctgttttgcctgaattcactgtttacacagaatttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttttgttaacattcgacaactttgctgttttgcctgaattcactgtttacacagaatttg 663
Query: 304 aattctgtgtactccttggtgatgattcttaattatattcaaggttatttttttcacagt 363
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 662 aattctgtgtactccttggtgatgattcttaattatattcaaggtta-ttttttcacagt 604
Query: 364 attatttcccaaattattaacttgggtgttgaactttcccatctagctatttgaattgtt 423
|||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 603 attatttcttaaattattaacttgggtgttgaactttcccacctagctatttgaattgtt 544
Query: 424 aacactgatcaaatttcacagaaaatttctgagtctcaattttagttttcacccttgtca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aacactgatcaaatttcacagaaaatttctgagtctcaattttagttttcacccttgtca 484
Query: 484 aatcgtcatcattatacctatttgtgaggataaactgagacaagattctaaaatagcaag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aatcgtcatcattatacctatttgtgaggataaactgagacaagattctaaaatagcaag 424
Query: 544 catatcctaacatataattatatagtcaataaatgtaagtacttttcttttagtcttaga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 catatcctaacatataattatatagtcaataaatgtaagtacttttcttttagtcttaga 364
Query: 604 atatgctaaaagtagaaatgaaagatttttcagcc 638
|||||||||||||||||||||||||||||||||||
Sbjct: 363 atatgctaaaagtagaaatgaaagatttttcagcc 329
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1037
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1027
Effective search space: 644956
Effective search space used: 644956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no308_p08.g1 MSMg01no308_p08.g1 CHROMAT_FILE:
MSMg01no308_p08.g1 PHD_FILE: MSMg01no308_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:50:25 2005
(286 letters)
>mm_chrX_135462367_135463052
Length = 686
Score = 511 bits (264), Expect = e-149
Identities = 277/286 (96%), Gaps = 8/286 (2%)
Strand = Plus / Plus
Query: 1 actttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcctgagttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgtagaccaggctggcctcaaactcagaaatctgcctgcctctgcctcctgagttc 260
Query: 61 tgggactaaaggcatgcaccaccacgctcggctgggatgcaatttttcttgtcttactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggactaaaggcatgcaccaccacgctcggctgggatgcaatttttcttgtcttactta 320
Query: 121 actgagacccacattagaggaagtaatgatgctaagaggaaggaagaaaaagcgataaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 actgagacccacattagaggaagtaatgatgctaagaggaaggaagaaaaagggataaat 380
Query: 181 aagagtgggcaagaggggagaaaatattaatggtatttatttatttatttatttatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagagtgggcaagaggggagaaaatattaatggtatttatttatttatttat-------- 432
Query: 241 ctatctaattatttattttgctggctatagaaattataatgagtca 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctatctaattatttattttgctggctatagaaattataatgagtca 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
