CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAGTAGTACATGTAGTGCTTTTCTGAAAGATTGCTCAGTGTTTTC
ATTTCCTGTAATATTTTCTCATCTCTAATTTCATTTGAAGGTCACAGTGA
CTCCATGCATGAGGCAGGACTGGCATCATTCATTCATTTATGTATTTAAT
GAATGTTTGCTGTGCCCTGACCATATGCTAGACCTTATCGTTGGAACTGA
GGATAGAGCAATGGAAAAGAAAAAAGAAAACAAACCACAGACCTAGTTTC
AACCCTCTGGAGCTCCATTTCAAGGATAGTCACTGATAAGGAAACTGTAC
AAGTTGCGTGGTTTGTAAGAGGTAGAACTCAGACTAGAACTAAGGTTTGC
TGCTGTTTACTGTGATGTACATTCCTCTCTCGTCTGTCTGTGTTTAGTTT
CCCATGTATTCAACAACTTCCTTTTTTATACTTCCTTCTTTGCTTTAAAG
TGTTTTTGCCTGAAAGACAAAAACCAACCAACCAAATATACAAACAAAAC
CACGGAAACAAACAATAAATAATCTTGAATTTGCTATTGGATTATACTTT
TAGAACACCCCTTTTAGTTTTCCATTCAAGTTTTATTATACATAATATTT
AGTTGGACGGGTGATGCGTCAGCACTCCAGTGTCCCTGTCCCTGTGCTAT
TAGCTAAGCCACACTATTTAACTGTATGATCTGGTC

NNAAGGCTTTTTTTNTTTTNCCCCCACTCTCCTANNNNNNNNNGNNNNNN
NNTTAACTATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATGCCTTGATAGCAAAC
AAACAAAAACTTGAAAATCAAATTGTCCAATTAAGAACAGAGCAAAGCAC
TTTGCCCCTTCTTAGAAATGGGAACAAAACACCCATTGAAGGAGTTACAG
AGACAAAATGTGGAGCTGTGACGAAAGAATGGACCATCTAGTGATTGCCA
TATGCAGGGATCCATCCCATAATCAGCTCCCAAACGCTGACACCATTGCA
TACACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTCTCTCCTGTG
AGACTATGCCGGGGCCTAACTTTTTTTTAACGCCACACCACAGTCAGCTA
TTGGATGGGTCACACGGCCCCCAATGCACGAGCTAAAGAAATTACTCAGG
GAGCTGGGGGGAACTGCAACCCTATAGGTGGAACAACATTATGAACTAAC
CAATACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCC
TAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGCAAACTGTATA
TGCCCCAGTACAGGGAAACCCCAGGGCCAAAACGGGTGAGTGGGTGGGTA
GTGTATTGGCGGGTNCCCTTCCCTTTTCTCCCCCTTCCATTTACCCTCTC
TCATTCATTATCCCTCCCTCTTTTCCTCTTATCCCCATCTAA

Query= MSMg01no311_g18.b1 MSMg01no311_g18.b1 CHROMAT_FILE:
MSMg01no311_g18.b1 PHD_FILE: MSMg01no311_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:16 2005
         (692 letters)



>mm_chrX_139446193_139447284
          Length = 1092

 Score = 1172 bits (606), Expect = 0.0
 Identities = 618/622 (99%)
 Strand = Plus / Minus

                                                                        
Query: 71   tttctcatctctaatttcatttgaaggtcacagtgactccatgcatgaggcaggactggc 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 tttctcatctctaatttcatttgaaggtcacagtgactccatgcatgaggcaggactggc 1033

                                                                        
Query: 131  atcattcattcatttatgtatttaatgaatgtttgctgtgccctgaccatatgctagacc 190
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1032 atcattcattcatttatgtatttaatgaatgtttgctgtgccctgactatatgctagacc 973

                                                                        
Query: 191  ttatcgttggaactgaggatagagcaatggaaaagaaaaaagaaaacaaaccacagacct 250
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  ttatcgttggaactgaggatagagcaatggaaaagaaaaaagaaaacaaaccacagacct 913

                                                                        
Query: 251  agtttcaaccctctggagctccatttcaaggatagtcactgataaggaaactgtacaagt 310
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  agtttcaaccctctggagctccatttcaaggatagtcactgataaggaaactgtacaagt 853

                                                                        
Query: 311  tgcgtggtttgtaagaggtagaactcagactagaactaaggtttgctgctgtttactgtg 370
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 852  tgcgtggtttgtaagaggtagaactcagactagaactaaggtttgctgttgtttactgtg 793

                                                                        
Query: 371  atgtacattcctctctcgtctgtctgtgtttagtttcccatgtattcaacaacttccttt 430
            ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 792  atgtatattcctctctcgtctgtctgtgtttagtttcccatgtattcaacatcttccttt 733

                                                                        
Query: 431  tttatacttccttctttgctttaaagtgtttttgcctgaaagacaaaaaccaaccaacca 490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732  tttatacttccttctttgctttaaagtgtttttgcctgaaagacaaaaaccaaccaacca 673

                                                                        
Query: 491  aatatacaaacaaaaccacggaaacaaacaataaataatcttgaatttgctattggatta 550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672  aatatacaaacaaaaccacggaaacaaacaataaataatcttgaatttgctattggatta 613

                                                                        
Query: 551  tacttttagaacaccccttttagttttccattcaagttttattatacataatatttagtt 610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612  tacttttagaacaccccttttagttttccattcaagttttattatacataatatttagtt 553

                                                                        
Query: 611  ggacgggtgatgcgtcagcactccagtgtccctgtccctgtgctattagctaagccacac 670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552  ggacgggtgatgcgtcagcactccagtgtccctgtccctgtgctattagctaagccacac 493

                                  
Query: 671  tatttaactgtatgatctggtc 692
            ||||||||||||||||||||||
Sbjct: 492  tatttaactgtatgatctggtc 471


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)