NCCCGTTTTNNNNNNNGCAGTGGGCGCTAAXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTTGTTCAGTTCTGACCCTTATTTTTTAATGGGGTTGT
TTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATT
AGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGG
TGGTCTCTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGA
GTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACAGAACAAGCCATT
GCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTT
CCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTT
CTTTGATCCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCG
ATTCCCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTT
GAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGA
TCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTC
CATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTACCAC
AATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGG
TTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTGGGTTTTTTGTTATTC
CAGATGAATTTGCAAATTGCTCCTTCTAATTCATTGAAGAATTGAGTTGG
AATTTTGATGGGGATTGCATTGAATCTGTAAATTGCTTTTGGCAAAATAG
CCATTTTTACATATTGATCCTGCCAATCCCTGACATGGGAAATCTTTCCA
TCTTCTGAGAATCTCTTTAATTCTTTTCTCCGAAACTTGAAGTTTTATTC
TACATATCTTTCTCTTCCTTAATAAAGTCCCCCCAAATATTTTTTTTTTT
TTTCATATTCTTTAAATGTGTTCCCTTCTTTTTCATTTCTCATTTGCTCT
CTTATTGACATATATTATCCATAAATTCTTTTTATCTTTTACCTTATATT
CTTCTCAATTCATTTTCATTTTTCCTCTTTTCACTACCTTATTCTTTACC
TCATTTCTTCTTTCTCATATCCTCTTTTTCTCTTTTCTTCTTTCTTTTCC
CCTCTTTCTTTCTGTTTATTCCA

NNNAATGTNNNNNNNNTATGCATGGAGGCTGGXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGCAGCAGGTTTTCCAA
GCAGAACAATTCAGTCAGAAGCTCAGAGAACCCGTTTTTTAATCCCCTTG
GAGTTGAACCAGCCAGCCAGAGTTCAGAAAGAGCAAGAAAGGTTGAGTTT
ATCCATCTATAAGTCTTGGAGGCTGAAACATTCTAGACCTATGTTAGGAG
ATGAGGCTGGATGCTGAAGCCTTCAAGGTTCATGCTTGGAGAAGATTAGA
TTGTACAGAGACTAGAAGCTTCCAGGCCTAGAACTAGGGATACAGAGAAA
TTCTCTGGATTCATCTCAAGCCGTGTATTCTATTCATAATACTTGGGTAA
GGTTCCCGTCTCTATCCCTTCATCAGAGGAAGTAAAAGAGACATTTACAG
AGGTGTATATATTTCTATTAATATATTTAGTTAACTACAATGATATATGT
GCTAACTTTTAGTCTAGCACAGAGCTATAGTTGTGAGCGAAAAAAAAAAG
GCAGAAGTAAAATATCCAGTTTCATCCTGTTAATTTTGCCACATTGCAAT
AAGGTCATTGCACAATCTTGTGCTTGCATACAGACACATGAAAATTCTAT
AATTTTAATGTATTACTTCTAAAGGAGAGTAAAATATATGTAGGTGATGG
GATTTATGTGTACATATGAATACCCTTATATGCACAATTCTAGAAATGAT
TTCACTAAAAGAAGTGACTAAGATCTTCTCTTTTCTTAACTTCCTATGTT
ATGTCTGAGCTTTTCATTGACCAAAACCAACATATTAGTCTACAAGGTAT
AAATTGTAGGAGTCAATCTCACACTTGTGTTAGTAGCACAAAAATGACAC
CTAAAATGGCTTCAGACTTGTTAGCAAAAATAAAAATAAAATAGAGTGTA
GAGAGGTATTTAACATTTTTGACGTTAAAAAAATCCCCAACATAAAATTC
TGTTTTTATGAATTTTCCTTTAAAATAAAGGAAAAATAATTACTTTTTTC
AAACAACGGACTGGGGTAAAAAACTGTGGCTAAAAAACTTTGCCTTGCAA
AATGGTCCAAAAACTTTCAAAAAAAAGGAAATTTTTTGGTGCCAAACCTT
AAATCTTCCCAAGGGGAAAGGGTTGTTTGAAAAAAAAAAAAAAAAAACCT
TTTAAAAACATTTTTTCTGCCGGGGGGGGGGGGCGCCCCCTTTTCTCCCC
CCCTGCTAAAAAAAAGAGGTGGTTTT

Query= MSMg01no313_i22.g1 MSMg01no313_i22.g1 CHROMAT_FILE:
MSMg01no313_i22.g1 PHD_FILE: MSMg01no313_i22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:23 2005
         (808 letters)



>mm_chrX_80168661_80169869
          Length = 1209

 Score = 1518 bits (785), Expect = 0.0
 Identities = 803/809 (99%), Gaps = 1/809 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcagcaggttttccaagcagaacaattcagtcagaagctcagagaacccgttttttaat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201  agcagcaggttttccaagcagaacaattcagtcagaagctcagagaacccgttttttaat 260

                                                                        
Query: 61   ccccttggagttgaaccagccagccagagttcagaaagagcaagaaaggttgagtttatc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261  ccccttggagttgaaccagccagccagagttcagaaagagcaagaaagggtgagtttatc 320

                                                                        
Query: 121  catctataagtcttggaggctgaaacattctagacctatgttaggagatgaggctggatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321  catctataagtcttggaggctgaaacattctagacctatgttaggagatgaggctggatg 380

                                                                        
Query: 181  ctgaagccttcaaggttcatgcttggagaagattagattgtacagagactagaagcttcc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381  ctgaagccttcaaggttcatgcttggagaagattagattgtacagagactagaagcttcc 440

                                                                        
Query: 241  aggcctagaactagggatacagagaaattctctggattcatctcaagccgtgtattctat 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441  aggcctagaactagggatacagagaaattctctggattcatctcaagccgtgtattctat 500

                                                                        
Query: 301  tcataatacttgggtaaggttcccgtctctatcccttcatcagaggaagtaaaagagaca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501  tcataatacttgggtaaggttcccgtctctatcccttcatcagaggaagtaaaagagaca 560

                                                                        
Query: 361  tttacagaggtgtatatatttctattaatatatttagttaactacaatgatatatgtgct 420
            ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 561  tttacagaggtgtatatatttctaaaaatatatttagttaactacaatgatatatgtgct 620

                                                                        
Query: 421  aacttttagtctagcacagagctatagttgtgagcg-aaaaaaaaaaggcagaagtaaaa 479
            | |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 621  agcttttagtctagcacagagctatagttgtgaggggaaaaaaaaaaggcagaagtaaaa 680

                                                                        
Query: 480  tatccagtttcatcctgttaattttgccacattgcaataaggtcattgcacaatcttgtg 539
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681  tatccagtttcatcctgttaattttgccacattgcaataaggtcattgcacaatcttgtg 740

                                                                        
Query: 540  cttgcatacagacacatgaaaattctataattttaatgtattacttctaaaggagagtaa 599
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741  cttgcatacagacacatgaaaattctataattttaatgtattacttctaaaggagagtaa 800

                                                                        
Query: 600  aatatatgtaggtgatgggatttatgtgtacatatgaatacccttatatgcacaattcta 659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  aatatatgtaggtgatgggatttatgtgtacatatgaatacccttatatgcacaattcta 860

                                                                        
Query: 660  gaaatgatttcactaaaagaagtgactaagatcttctcttttcttaacttcctatgttat 719
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  gaaatgatttcactaaaagaagtgactaagatcttctcttttcttaacttcctatgttat 920

                                                                        
Query: 720  gtctgagcttttcattgaccaaaaccaacatattagtctacaaggtataaattgtaggag 779
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  gtctgagcttttcattgaccaaaaccaacatattagtctacaaggtataaattgtaggag 980

                                         
Query: 780  tcaatctcacacttgtgttagtagcacaa 808
            |||||||||||||||||||||||||||||
Sbjct: 981  tcaatctcacacttgtgttagtagcacaa 1009


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 808
Length of database: 1209
Length adjustment: 10
Effective length of query: 798
Effective length of database: 1199
Effective search space:   956802
Effective search space used:   956802
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)