Query= MSMg01no313_j19.b1 MSMg01no313_j19.b1 CHROMAT_FILE:
MSMg01no313_j19.b1 PHD_FILE: MSMg01no313_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:30 2005
(210 letters)
>mm_chrX_80552994_80553603
Length = 610
Score = 391 bits (202), Expect = e-113
Identities = 208/210 (99%)
Strand = Plus / Plus
Query: 1 tccaacccagtataaaatattactcaagagctgggaactgaccacatctgctgtctcaga 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tccaacccagtataaaatattactcatgagctgggaactgaccacatctgctgtctcaga 260
Query: 61 catgggagtgaaaattttaccaaaggtgagaaaataactactatagtaagaagatatttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 catgggagtgaaaattttaccaaaggtgagaaaataactactatagtaagaagatacttg 320
Query: 121 tgtttttttttctgttaggtgatatatatgtgaaatagttctgccagtcctttgcagtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttttttttctgttaggtgatatatatgtgaaatagttctgccagtcctttgcagtaa 380
Query: 181 aatttttccaaaattagtatataattaaga 210
||||||||||||||||||||||||||||||
Sbjct: 381 aatttttccaaaattagtatataattaaga 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no313_j19.g1 MSMg01no313_j19.g1 CHROMAT_FILE:
MSMg01no313_j19.g1 PHD_FILE: MSMg01no313_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:30 2005
(205 letters)
>mm_chrX_80629976_80630580
Length = 605
Score = 369 bits (191), Expect = e-107
Identities = 203/209 (97%), Gaps = 4/209 (1%)
Strand = Plus / Minus
Query: 1 tgtgtaatctgacagatacaaacaaatacacataagtaaaaatgtataaaaataaaactt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 329 tgtgtaatctgacagatacaaacaaatacacataagtaaaaatgtataagaataaaactt 270
Query: 61 attatctcacatataacatatatcatacttatataatatatatataaagtcccaatatta 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 269 attatctcacatataacatatatcatacttatataatatatatgtaaagtcccaatatta 210
Query: 121 ttatatgaa----tatctatctatctatctatctatgcatctatctatctctttttatgt 176
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttatatgaatatctatctatctatctatctatctatgcatctatctatctctttttatgt 150
Query: 177 attctatgcttctaagcactctctgaagt 205
|||||||||||||||||||||||||||||
Sbjct: 149 attctatgcttctaagcactctctgaagt 121
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 205
Length of database: 605
Length adjustment: 8
Effective length of query: 197
Effective length of database: 597
Effective search space: 117609
Effective search space used: 117609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
