Query= MSMg01no316_b03.b1 MSMg01no316_b03.b1 CHROMAT_FILE:
MSMg01no316_b03.b1 PHD_FILE: MSMg01no316_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(689 letters)
>mm_chrX_126470366_126471453
Length = 1088
Score = 1309 bits (677), Expect = 0.0
Identities = 683/685 (99%), Gaps = 1/685 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtatggtactcgtcactataactggcagtgagctactattcgttttcggcatg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 gaattcagtatggtact-gtcactataactggcagtgagctactattcgttttcggcatg 713
Query: 65 tagtcatccaaagcaatgagctattttcacaatgattcagtgaaaaataatcagtgactt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 tagtcatccaaagcaatgagctattttcacaatgattcagtgaaaaataatcagtgactt 653
Query: 125 agtggtacaatgataaagggatatcagttctaaatataatgtgcagtattgaatctatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agtggtacaatgataaagggatatcagttctaaatataatgtgcagtattgaatctatcc 593
Query: 185 gagagagaaatctataaatatgatcatagaaaaatagcatggatcaaccttcatatcata 244
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 592 gagagagaaatctataaatatgatcatagaaaaatagcatggagcaaccttcatatcata 533
Query: 245 ggagtctaaccaaacctgtatttacagccttcagtatctgctttgacatttgagaaggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 ggagtctaaccaaacctgtatttacagccttcagtatctgctttgacatttgagaaggaa 473
Query: 305 aaaaaatcatggagttctttaaatttaatgcttagaaattatatttgattataaatatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aaaaaatcatggagttctttaaatttaatgcttagaaattatatttgattataaatatta 413
Query: 365 ctcatgtttcctttatacccagcactattaaattatcaagattatttcttcatctgggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ctcatgtttcctttatacccagcactattaaattatcaagattatttcttcatctgggaa 353
Query: 425 agtgtatgacaaaagagaatgatttctatttattcatttgaaatcagtcacccacaaatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agtgtatgacaaaagagaatgatttctatttattcatttgaaatcagtcacccacaaatg 293
Query: 485 ccagactacctaaaaacagatggttaagagcattttggattcattcaatgaaaattattg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccagactacctaaaaacagatggttaagagcattttggattcattcaatgaaaattattg 233
Query: 545 ttattttaaaagattattgttattttttaaatggggttcatttacacaacgcaatactac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ttattttaaaagattattgttattttttaaatggggttcatttacacaacgcaatactac 173
Query: 605 tcagctattaggaatgaagacatcctgagtttgcagtcaaatggatggaagtagaaaata 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tcagctattaggaatgaagacatcctgagtttgcagtcaaatggatggaagtagaaaata 113
Query: 665 ccatcctaagtgaggtaactcagac 689
|||||||||||||||||||||||||
Sbjct: 112 ccatcctaagtgaggtaactcagac 88
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1088
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1078
Effective search space: 731962
Effective search space used: 731962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_b03.g1 MSMg01no316_b03.g1 CHROMAT_FILE:
MSMg01no316_b03.g1 PHD_FILE: MSMg01no316_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:44 2005
(643 letters)
>mm_chrX_126302829_126303871
Length = 1043
Score = 1236 bits (639), Expect = 0.0
Identities = 642/643 (99%)
Strand = Plus / Plus
Query: 1 tacctttgaaattcttcatgttcaaaaattaaccacatgtaataaatgttttagagaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacctttgaaattcttcatgttcaaaaattaaccacatgtaataaatgttttagagaagc 260
Query: 61 ccaccacagtaataagcaagccttattaggcccaagataagcaattcctgcctgctatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaccacagtaataagcaagccttattaggcccaagataagcaattcctgcctgctatgt 320
Query: 121 acacagagttggagaatatggtgttacaaacatatggtgcaggatagagtggtaagtaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacagagttggagaatatggtgttacaaacatatggtgcaggatagagtggtaagtaca 380
Query: 181 gatgcaggggtaaaggtgtttgggaacacagatcaacttcactacaaatggaagataggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgcaggggtaaaggtgtttgggaacacagatcaacttcactacaaatggaagataggg 440
Query: 241 ataaaaagcttcttgaaaaggacagagattgtttttaacgaatggtgatagagtgagaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaaaagcttcttgaaaaggacagagattgtttttaacgaatggtgatagagtgagaat 500
Query: 301 agtatgtgtatcatagtcagtgttggattatatataggaaggcattaaagactggatggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtatgtgtatcatagtcagtgttggattatatataggaaggcattaaagactggatggc 560
Query: 361 ttacacgtaacaggattgatatatagttctggaggcttgaaatcaaggatcaagatgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacacgtaacaggattgatatatagttctggaggcttgaaatcaaggatcaagatgtca 620
Query: 421 tcctggctaggttctgttgagggtcctttcgtggttactcactgctgctttcttgtggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcctggctaggttctgttgagggtcctttcgtggttactcactgctgctttcttgtggta 680
Query: 481 gcttcacatggtcaagagtttagtaatctctcatctaatctgtaatatctttgagaggct 540
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gcttcacatggtcaagagcttagtaatctctcatctaatctgtaatatctttgagaggct 740
Query: 541 ccaggtacttcttaataccattatatcagaggaagatattttaatctgtgaatcttctgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaggtacttcttaataccattatatcagaggaagatattttaatctgtgaatcttctgg 800
Query: 601 aaacactttcaacatacaaggcaacattacaagggagctaaga 643
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaacactttcaacatacaaggcaacattacaagggagctaaga 843
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
