This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-317L24
Chromosome
X (Build37)
Map Location
128,447,984 - 128,577,883
singlet/doublet
doublet
Overlap gene
none
Upstream gene
LOC665799
,
LOC670449
,
LOC245600
Downstream gene
EG631264
,
LOC665846
,
LOC665850
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC665799
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665799
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC670449
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:670449
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
name
LOC245600
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:245600
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins
pseudo
: _no_value
name
EG631264
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:631264
MGI:3643915
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
LOC665846
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665846
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins
pseudo
: _no_value
name
LOC665850
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665850
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins
pseudo
: _no_value
name
LOC670449
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149272262
GeneID:670449
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
product
: similar to retinitis pigmentosa GTPase regulator
transcript_id
: XM_001475063.1
name
LOC670449
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149272263
GeneID:670449
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001475113.1
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 3
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 2
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 1
pseudo
: _no_value
name
EG631264
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:631264
definition
number
: 2
pseudo
: _no_value
name
EG631264
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:631264
definition
number
: 1
pseudo
: _no_value
name
LOC665846
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665846
definition
number
: 2
pseudo
: _no_value
name
LOC665846
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665846
definition
number
: 1
pseudo
: _no_value
name
LOC665850
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665850
definition
number
: 2
pseudo
: _no_value
name
LOC665850
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665850
definition
number
: 1
pseudo
: _no_value
name
LOC245600
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149272264
GeneID:245600
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins
product
: similar to transforming acidic coiled-coil containing protein 1 long
pseudo
: _no_value
transcript_id
: XR_032090.1
clone name
MSMg01-434E23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-154E05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190G07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-186B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531L13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336H15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-081P19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-082E12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-445F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-445F14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-236A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-148C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-534L18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392H24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181L22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-396K17
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-455C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-317L24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-300B14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-480E16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-481G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545M15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268N11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-514O13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436F18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-156C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-090B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-377B15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-063G13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-168K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-483F09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392O19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-216B02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-487J18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340C04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-378D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-515E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-496C05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189A14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-049I02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-482I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-173G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-485D24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484J10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-128E05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-270G10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-332E17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-449C24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-334D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302F03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-037D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-067F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061I01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-333N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198J05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-334L19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-281N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-099O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-024O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005I19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-302I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119O20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-208D13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-254P08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-122L22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-232K18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-195G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-335H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207E02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-206J12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297F11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-180F19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-281D10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-315M03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-344O20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-283C17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095M09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-071P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-269C06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-228H17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-215I03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-275L08
singlet/doublet
singlet
plural/unique
unique
