Query= MSMg01no320_c23.b1 MSMg01no320_c23.b1 CHROMAT_FILE:
MSMg01no320_c23.b1 PHD_FILE: MSMg01no320_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:39 2005
(515 letters)
>mm_chrX_59698548_59699462
Length = 915
Score = 934 bits (483), Expect = 0.0
Identities = 507/515 (98%)
Strand = Plus / Plus
Query: 1 tattttcatagaaacagacaaaacaaatatcatacttttatgagaaaaaggaaatttcaa 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattttcatagaaacagacaaagcaaatatcatacttttatgagaaaaaggaaatttcaa 260
Query: 61 ttaaactgtgcatatttcagcctaaagatccaataatttcaagggcacaaagtatatata 120
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 261 ttaaactgtgcatatttcagcctaacgatccaataaattcaagggcacaaagtatatata 320
Query: 121 caaagttaggatgtgttaaatatagttcctttctcaataaatctttgaataggcattcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagttaggatgtgttaaatatagttcctttctcaataaatctttgaataggcattcat 380
Query: 181 atctccctgattttccctgacctcattagaactgcaatcaaatatttagagaaagaaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctccctgattttccctgacctcattagaactgcaatcaaatatttagagaaagaaaga 440
Query: 241 taatatcttacatggcttttgtaacttcatcatgaacatttactaaaaagatttatacat 300
|||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatagcttacatggtttttgtaacttcatcatgaacatttactaaaaagatttatacat 500
Query: 301 atacttgttgttttaaggaaagctttctttttatttaagaaaacatattgcaaatatctc 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacttgttgttttaaggaaggctttctttttatttaagaaaacatattgcaaatatctc 560
Query: 361 catttatagctctttaaattgtcagaatttatcattaacaatgtgagaatgcccatctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttatagctctttaaattgtcagaatttatcattaacaatgtgagaatgcccatctgc 620
Query: 421 tcttgtatgtataacagaataaatcatatgtataacagaataaatcaatgatatcatatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttgtatgtataacagaataaatcatatgtataacagaataaatcaatgatatcatatc 680
Query: 481 ataattcagtaagacaaactgcaacaaataataga 515
||||||||||||| |||||||||||||||||||||
Sbjct: 681 ataattcagtaaggcaaactgcaacaaataataga 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_c23.g1 MSMg01no320_c23.g1 CHROMAT_FILE:
MSMg01no320_c23.g1 PHD_FILE: MSMg01no320_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:39 2005
(225 letters)
>mm_chrX_59855626_59856252
Length = 627
Score = 397 bits (205), Expect = e-115
Identities = 221/227 (97%), Gaps = 2/227 (0%)
Strand = Plus / Minus
Query: 1 ctgaaatttataaggttttaaatatttgaaaactaatattaaatattttgtaccgtgtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 427 ctgaaatttataaggttttaaatatttgaaaactaatattaaatattttgtagtgtgtta 368
Query: 61 cctataaacaaagagatgcaactctgtaagaagcctcaatggg--ttttttttgtatatt 118
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 367 cctataaacaaagagatgcaactctgtaagaagcctcaatgggttttttttttgtatatt 308
Query: 119 cctattttgttgtactttaataaacaaataagagagacaatcatttgtagagaagtttta 178
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 307 cctattttgttgtactttaataaacaaatacgagagacaatcatttgtagagcagtttta 248
Query: 179 taagaatatgtaaaagctgtaatttagagtaagaatgttccagttgt 225
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taagaatatgtaaaagctgtaatttagagtaagaatgttccagttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 627
Length adjustment: 9
Effective length of query: 216
Effective length of database: 618
Effective search space: 133488
Effective search space used: 133488
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
