Query= MSMg01no321_k18.b1 MSMg01no321_k18.b1 CHROMAT_FILE:
MSMg01no321_k18.b1 PHD_FILE: MSMg01no321_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:28 2005
(317 letters)
>mm_chrX_163154152_163154869
Length = 718
Score = 536 bits (277), Expect = e-157
Identities = 304/313 (97%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 4 ggaattcatgtatacacagaaacaccagtgcgccacaactcccgtaattaccaagtagca 63
|||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ggaattcatgtaaacaaaggaacaccagtgcgccacaactcccgtaattaccaagtagca 457
Query: 64 ctctacacttcagaacgaaaagtcactagagagtagaaacgtgtgctttgcattttctca 123
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 456 ctctacacttcagaaagaaaagtcactagagagtagaaatgtgtgctttgcattttctca 397
Query: 124 tgtaatcatgatggctgtgcttttctttttgtgtggtagaagattctagaaagctgttgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tgtaatcatgatggctgtgcttttctttttgtgtggtagaagattctagaaagctgttgt 337
Query: 184 ctaacttgctgt-aaaaaaatactctgtttagtgatagtgtttgagatgctcagcagaaa 242
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ctaacttgctgtaaaaaaaatactctgtttagtgatagtgtttgagatgctcagcagaaa 277
Query: 243 ggtttacaacccactcaccacctctttaagagtcaagttggcatgaacagactgtaatag 302
||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||
Sbjct: 276 ggtttacaacccactcaccacctatttaagagtcaagttggcatgaacagattataatag 217
Query: 303 tggtggctctagc 315
|||||||||||||
Sbjct: 216 tggtggctctagc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_k18.g1 MSMg01no321_k18.g1 CHROMAT_FILE:
MSMg01no321_k18.g1 PHD_FILE: MSMg01no321_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:28 2005
(338 letters)
>mm_chrX_162992199_162992936
Length = 738
Score = 596 bits (308), Expect = e-175
Identities = 329/336 (97%)
Strand = Plus / Plus
Query: 1 aataaactattagattgttttatgtgggtttctccttaatttatacgaatagaatatttg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataaactattagattgtttcatgtgggtttctccttaatttatacgaatagaatatttg 260
Query: 61 aaaaagaccctgcaaatatatatgttatctcttaggttgttttgctcaggtaagatctga 120
||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 aaaaagaccctgcaaatatgtatgttatctcttaggttgttttgctaaggtaagatctga 320
Query: 121 gtaaatgatgatttagggctaagacatagaggaactagggggcaatacacattaccttcc 180
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 321 gtaaatgatgatttagggctaagacatagaagaactagggggcaatacacattatcttcc 380
Query: 181 aaagccccagatgcgctgggcatctgcatgattgcaaccttgggaagctggccgaaggca 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaagccccagatgtgctgggcatctgcatgattgcaaccttgggaagctggccgaaggca 440
Query: 241 gcaggtgtgtgctttctgggagctgaggtggcagaagaagatgagatggcaagagaggag 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaggtttgtgctttctgggagctgaggtggcagaagaagatgagatggcaagagaggag 500
Query: 301 gggaggggaaggcaggcagggaaggtgggtttgcct 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggaggggaaggcaggcagggaaggtgggtttgcct 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
