Query= MSMg01no321_o22.b1 MSMg01no321_o22.b1 CHROMAT_FILE:
MSMg01no321_o22.b1 PHD_FILE: MSMg01no321_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:47 2005
(679 letters)
>mm_chrX_164479117_164480195
Length = 1079
Score = 1274 bits (659), Expect = 0.0
Identities = 671/675 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaacaccatttcctcctaacaaaagtatctttcagagagacattctatttaatt 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaacaccatttcatcctaacaaaagtatctttcagagagacattctatttaatt 264
Query: 65 ttgtcactttgaaattacatctgcagatttttttaaatgcctagttttgacattttaaaa 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgtcactttgaaattatatctgcagatttttttaaatgcctagttttgacattttaaaa 324
Query: 125 cctttatattttgggaaagtttaacatttcactgtttgatattttaaaaatataacttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cctttatattttgggaaagtttaacatttcactgtttgatattttaaaaatataacttac 384
Query: 185 cactcaatattacctctttaaatgtattgaatgttaaggctgtcattttgtgtctcatat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cactcaatattacctctttaaatgtattgaatgttaaggctgtcattttgtgtctcatat 444
Query: 245 atctaaattcaaagcccaggttgtctggttttctttttttcccttttttagcatgctggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atctaaattcaaagcccaggttgtctggttttctttttttcccttttttagcatgctggg 504
Query: 305 gtgatctgtgaatttcctgtaatatctcatgagaagtacagaatatcagtcttccctgcc 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgatctgtggatttcctgtaatatctcatgagaagtacagaatatcagtcttccctgcc 564
Query: 365 tactgggagcaccgccagggagcactgccaggctgccttcaaatgaatgagaagatactc 424
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tactgggagcactgccagggagcactgccaggctgccttcaaatgaatgagaagatactc 624
Query: 425 ctccttgtcttcttgacaaaatgagacatcccttgctcatcctttctgcctagtcagtct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctccttgtcttcttgacaaaatgagacatcccttgctcatcctttctgcctagtcagtct 684
Query: 485 tcctggcaaatctatatgtaggtctccaatcagaggaagtgtttcagatggcaggatcct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcctggcaaatctatatgtaggtctccaatcagaggaagtgtttcagatggcaggatcct 744
Query: 545 agaacactctgcctttgcacctacctgttctatttgtgacctctccagagaagggtcaac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaacactctgcctttgcacctacctgttctatttgtgacctctccagagaagggtcaac 804
Query: 605 tttgtcagggtcaaattttgttataaaactgtaacctcactccatactcagcagataatc 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttgtcagggtcaaattttgttataaaactgtaacctcactccatactcagcagataatc 864
Query: 665 tggcccaaactaagc 679
|||||||||||||||
Sbjct: 865 tggcccaaactaagc 879
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1079
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1069
Effective search space: 715161
Effective search space used: 715161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_o22.g1 MSMg01no321_o22.g1 CHROMAT_FILE:
MSMg01no321_o22.g1 PHD_FILE: MSMg01no321_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:47 2005
(659 letters)
>mm_chrX_164659315_164660373
Length = 1059
Score = 1017 bits (526), Expect = 0.0
Identities = 573/590 (97%), Gaps = 5/590 (0%)
Strand = Plus / Minus
Query: 1 cacatgttaaagaagaaaacaaaacagaaaaatagatttagagagatgtgctggtacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 cacatgttaaagaagaaaacaaaacagaaaaatagatttagagagatgtgctggtacata 530
Query: 61 cttacaataccaggactcaagaagctcagacagaagaaaggtcatacgttcaaggccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 cttacaataccaggactcaagaagctcagacagaagaaaggtcatacgttcaaggccagc 470
Query: 121 ctgtgctaaattgtgagaccctgacctaaccactcaaaactccaaaaccataccacgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctgtgctaaattgtgagaccctgacctaaccactcaaaactccaaaaccataccacgttt 410
Query: 181 tgaccattcctaaattacccaggttcttgctttaaaatatattcaaatttatcagatgct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 409 tgaccattcctaaattacccaggttcttgctttaaaatatattcaaatttatcacatgct 350
Query: 241 gttttattttatatttttgagacagggtctcatgtagttctgactggcttcaaattcagt 300
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 349 gttttattttatatttttgagatagggtctcatgtagttctgactggcttcaaattcact 290
Query: 301 gtgaagctctggatatctgtgaacttgtgatcctcttgcctcccccccccaattgtcgtg 360
|||||||||||||||||||||||||| |||||||||||||||||| || || |||||||
Sbjct: 289 gtgaagctctggatatctgtgaacttctgatcctcttgcctccccttcctaactgtcgtg 230
Query: 361 attgcaggcatgtgctttc---gttgcaattttatacggttctggggatgatcatccact 417
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 229 attgcaggcatgtgctttcgttgttgcaattttatacggttctggggatgatcatccact 170
Query: 418 gccctaacggagctacagcctctgttcctttctaggagccactgaaaagttaagctgttt 477
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gccctaactgagctacagcctctgttcctttctaggagccactgaaaagttaagctgttt 110
Query: 478 tgttgtttttacataataatgcagtgaatttcacttacgcatttcctactgttatttgta 537
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 109 tgttgtttttacataataatgcagtgaatttcacttacgcatttcctattgttatttgta 50
Query: 538 cagttctcatataaccaaat-atacagaattcattttgctagtattttct 586
|||||||||||||||| ||| ||||| |||||||||||||| ||||||||
Sbjct: 49 cagttctcatataacc-aatcatacaaaattcattttgctaatattttct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
