Query= MSMg01no322_d04.b1 MSMg01no322_d04.b1 CHROMAT_FILE:
MSMg01no322_d04.b1 PHD_FILE: MSMg01no322_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:06 2005
(502 letters)
>mm_chrX_66864447_66865348
Length = 902
Score = 957 bits (495), Expect = 0.0
Identities = 498/499 (99%)
Strand = Plus / Plus
Query: 4 attttcatttcctagctgtaaggtcagaggggataaagctagtgtaatccataggccact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 attttcatttcctagctgtaaggtcagaggggataaagctagtgtaatccataggccact 263
Query: 64 ggccattggacagtcttctgtagggctgggatggacacggagccatcttatgctaaatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggccattggacagtcttctgtagggctgggatggacacggagccatcttatgctaaatta 323
Query: 124 aaaccaggtgagtacttttctactttgcctctgtacaatgtgtataggatttggcacaaa 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaaccaggtgggtacttttctactttgcctctgtacaatgtgtataggatttggcacaaa 383
Query: 184 tcagtatgtttgtcttttcattccacttggccagtagccatcagggattctctattttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcagtatgtttgtcttttcattccacttggccagtagccatcagggattctctattttca 443
Query: 244 ttttgaaattttacttggcagatccttaaaagtcactgggggacttttcctgagtaataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttgaaattttacttggcagatccttaaaagtcactgggggacttttcctgagtaataa 503
Query: 304 aaagcaattttcattgaaaactaattattttttcagatgaatatgccagctgtttgaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaagcaattttcattgaaaactaattattttttcagatgaatatgccagctgtttgaaaa 563
Query: 364 tgttctagtcacattaaagtatattttaataatgtgcacatgaatacagatctattagta 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgttctagtcacattaaagtatattttaataatgtgcacatgaatacagatctattagta 623
Query: 424 aactgctttttgacagtagcttgtaagtattatgttatactaggcctctaaacctccatc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aactgctttttgacagtagcttgtaagtattatgttatactaggcctctaaacctccatc 683
Query: 484 cacacaggtctagcaatgt 502
|||||||||||||||||||
Sbjct: 684 cacacaggtctagcaatgt 702
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_d04.g1 MSMg01no322_d04.g1 CHROMAT_FILE:
MSMg01no322_d04.g1 PHD_FILE: MSMg01no322_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:06 2005
(178 letters)
>mm_chrX_67024958_67025536
Length = 579
Score = 311 bits (161), Expect = 1e-89
Identities = 164/165 (99%), Gaps = 1/165 (0%)
Strand = Plus / Minus
Query: 4 atgtgtgattcaactgtccatctatatcagtttttggaagaaaaacttccagagatatgt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atgtgtgattcaactgtccatctatatcagtttttggaagaaaaacttccagagatatgt 309
Query: 64 aattttttggaggacttcatacagtgtcattgatgaccttattcctggagacactgactt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aattttttggaggacttcatacagtgtcattgatgaccttattcctggagacactgactt 249
Query: 124 -aaagttgtcagggctcaggggagttaaggtgatccatacttgac 167
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aaaagttgtcagggctcaggggagttaaggtgatccatacttgac 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 579
Length adjustment: 8
Effective length of query: 170
Effective length of database: 571
Effective search space: 97070
Effective search space used: 97070
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
