CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTAAAGCTACCTGATTTGCCCTCTAAAAACTGATATATTTGTGC
CTTTAGGAAGTTCAGATTTTTACAATATTAGTATCTTTCTTTCTCATCAT
CTGGTATCACACGAAATAATCTGGGAGTCTTTTGTAATGTCTAGGAAATA
GACAAAAGGCATCTTAACTTCATCATGGTAATAACATCCAAGTCAACAAA
CCTCAGAGATAGCTGCACACCCATGCCTGTCCACAAATGAATGGATTTTT
TAAAATGTAGTATATGGGCTAGTGAGCTGGCTCATTAGGTAAGGCTGCCT
GGTGCCAAGGCTGATAATCTGAGTACTATCCCTAGGACAAACAAGTAGAA
GGAAAAGTCCAACCTCTACAAGTTATCCTTTGACTACTGAGCATGAGCAC
AGAACACACATACATTCTTAAACTCTCAATAAATAAGTGAAATGAAAAAA
AGAACAATAGACAGTGACACACACACACACACACACACACACACACACCA
GAGTTTTATTTTCCATAAAGAAGAATGAAATCTAGTCATCTGCAGAAAGA
ATGTATGGAACTGTTAAGTATAATAAACTAGTCTCAGAAAGAGAAATATC
TTCTGTTTTCTTTTTATTAGAATCTAGATTTTAACATATAACATTAGAGT
AGATGAAAGAGCATTTGAGGTAAAGAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCACACTGCTTTCCATAGTGGC
TGTCAAGTTTGTACTCCTATCATCAATGTATGTGCTTTGATTTTTCAAAG
CCTACTTTTTATAGGTGTTCTTAAATGCTTTATCCTCCCTTCCTGCCCAC
CACCCACTATGGATAGTGGAAAAGAAAGGCTATTAGGATATAGGGGATGT
GGACCTTTTAGAAATAGTTCTTTGAAGCAAATCTAATCTGCATTGTCAGG
ATACCAGCAGTTCAGATTACACAAATCAGCAGTGGTGGCTGTATCCACTC
ATAAACACCATTCACACATCAGCAATGGCAGGTTGATCTAGAAGAAGCCA
TGAGGCTCTGCTATATGCCGCCCACAAGTAATTCCTTGGGGCAATTTCAA
TCTCCAATTTGTAGGATACCAGCAGTCCAGTTCAGTAGTGTCAGGATAAC
AAACATGAATCAGAAGCAGTGGCATGACACAGCAGAAACAACCAGGCCTC
AGCTGAATGGTCATGAGTCAGCAAGATCAACCAGAACTGGCAAGACTGCC
AGGAGAAGTTGTCTGCTGTGCCTCTCTCAACACAATGAAGATCAGCAAAG
ACTAAGTCTCAAGACCAACAAAGCTTGCAAGCCCCACTCCTGCCACTGTC
CATTGAGTCCTATTTATACTCACTCCA

Query= MSMg01no325_b12.b1 MSMg01no325_b12.b1 CHROMAT_FILE:
MSMg01no325_b12.b1 PHD_FILE: MSMg01no325_b12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:33 2005
         (682 letters)



>mm_chrX_157879571_157880652
          Length = 1082

 Score = 1152 bits (596), Expect = 0.0
 Identities = 617/630 (97%), Gaps = 10/630 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttaaagctacctgatttgccctctaaaaactgatatatttgtgcctttaggaa 64
           ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 gaattctttaaagctaagtgatttgccctctaaaaactgatatatttgtgcctttaggaa 571

                                                                       
Query: 65  gttcagatttttacaatattagtatctttctttctcatcatctggtatcacacgaaataa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gttcagatttttacaatattagtatctttctttctcatcatctggtatcacacgaaataa 511

                                                                       
Query: 125 tctgggagtcttttgtaatgtctaggaaatagacaaaaggcatcttaacttcatcatggt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tctgggagtcttttgtaatgtctaggaaatagacaaaaggcatcttaacttcatcatggt 451

                                                                       
Query: 185 aataacatccaagtcaacaaacctcagagatagctgcacacccatgcctgtccacaaatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aataacatccaagtcaacaaacctcagagatagctgcacacccatgcctgtccacaaatg 391

                                                                       
Query: 245 aatggattttttaaaatgtagtatatgggctagtgagctggctcattaggtaaggctgcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aatggattttttaaaatgtagtatatgggctagtgagctggctcattaggtaaggctgcc 331

                                                                       
Query: 305 tggtgccaaggctgataatctgagtactatccctaggacaaacaagtagaaggaaaagtc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tggtgccaaggctgataatctgagtactatccctaggacaaacaagtagaaggaaaagtc 271

                                                                       
Query: 365 caacctctacaagttatcctttgactactgagcatgagcacagaacacacatacattctt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 270 caacctctacaagttatcctttgactactgagcatgagcacagaacacacatacattctc 211

                                                                       
Query: 425 aaactctcaataaataagtgaaatgaaaaaaagaacaatagacagtg----------aca 474
           |||||||||||||||||||||||||||||||||||||||||||||||          |||
Sbjct: 210 aaactctcaataaataagtgaaatgaaaaaaagaacaatagacagtgacacacacacaca 151

                                                                       
Query: 475 cacacacacacacacacacacacacacaccagagttttattttccataaagaagaatgaa 534
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cacacacacacacacacacacacacacaccagagttttattttccataaagaagaatgaa 91

                                                                       
Query: 535 atctagtcatctgcagaaagaatgtatggaactgttaagtataataaactagtctcagaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90  atctagtcatctgcagaaagaatgtatggaactgttaagtataataaactagtctcagaa 31

                                         
Query: 595 agagaaatatcttctgttttctttttatta 624
           ||||||||||||||||||||||||||||||
Sbjct: 30  agagaaatatcttctgttttctttttatta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)