Query= MSMg01no328_d13.b1 MSMg01no328_d13.b1 CHROMAT_FILE:
MSMg01no328_d13.b1 PHD_FILE: MSMg01no328_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:19 2005
(407 letters)
>mm_chrX_45409088_45409894
Length = 807
Score = 659 bits (341), Expect = 0.0
Identities = 383/405 (94%), Gaps = 13/405 (3%)
Strand = Plus / Plus
Query: 1 acacagttaacccacctggtttcaaacacttggtctcacacccacccctttgcttatcaa 60
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 201 acacagttaacccacctggtttcaaacactcggtctcacatccacccctttgcttatcaa 260
Query: 61 atatttattgagctattctattgcactgggcacaatgctttatatggtgaatgagacaga 120
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 261 atatttattgagctattctattgcactgagcacaatgctttttatggtgaatgagacaga 320
Query: 121 cttggtcaagcagacaggtggtggaaccaaatttacagctttataagatcgctttggggc 180
|||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 321 cttggtcaagcagacaggtggtgggaccaaatttgcagctttaaaagatcgctttggggc 380
Query: 181 tggaaagatggcttaacagggaccaaatcttgccacacaagctccctagaatccagggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tggaaagatggcttaacagggaccaaatcttgccacacaagctccctagaatccagggtg 440
Query: 241 gaaggtagaactggctcctgaaacttatcctccagcctctatagctgtacagtggcatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggtagaactggctcctgaaacttatcctccagcctctatagctgtacagtggcatac 500
Query: 301 acacttgttgctgctgctattattattattattattattattatccccccccattattat 360
|||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 501 acacttgttgttgctgctattattattattattattattattat-------------tat 547
Query: 361 tattgaaataaattaaaggatcattttatgtggttgaacagatta 405
|||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 548 tattgaaataaattaaaggatcattttaggtggttgaacagatta 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_d13.g1 MSMg01no328_d13.g1 CHROMAT_FILE:
MSMg01no328_d13.g1 PHD_FILE: MSMg01no328_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:19 2005
(346 letters)
>mm_chrX_45581984_45582729
Length = 746
Score = 656 bits (339), Expect = 0.0
Identities = 342/343 (99%)
Strand = Plus / Minus
Query: 1 tattgacttgaggtgtaaagaaaagaattactctggctatagtagaatttaaagttggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tattgacttgaggtgtaaagaaaagaattactctggctatagtagaatttaaagttggca 484
Query: 61 tggatggaagtagggaagaacaaggcttgttaaaattttggtttggacaagggtgaaaac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 483 tggatggaagtagggaagaacaaggcttgttaaaattttggtttggacaaggttgaaaac 424
Query: 121 agagttggagaaatggatactggtttggaggaagggatgaaagttgcttgaagggaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agagttggagaaatggatactggtttggaggaagggatgaaagttgcttgaagggaacag 364
Query: 181 taaagtaatgattttattttgtaaaatagagagttaagagagatgatctgtggttaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 taaagtaatgattttattttgtaaaatagagagttaagagagatgatctgtggttaacca 304
Query: 241 aatagaaaacacaagtttatatgtatgatttaaaatgaaagagttaaccattggaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aatagaaaacacaagtttatatgtatgatttaaaatgaaagagttaaccattggaagaaa 244
Query: 301 taaaaatagtaactatattgaccaggtaaaagagggtggatgg 343
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 taaaaatagtaactatattgaccaggtaaaagagggtggatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
