NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCTGTTCCTGGAGCCTTAATTAAATATTTTTGTCTGCTACACAC
ATTTTTTAAATCATTTTATTTTAGCTCTATCCTTTGAGAACTGATCAGCT
TCATTTCTAATCCCTGTGCCTATTGTTTTAGGTGTTTCTCATCTTCACTG
GCCTGCTTTCTCTTCTAAAGTGAGTATCTAATGGTTCTTTGACCTTCATT
AGGAATTTTGAAATGCTGTTGCTACATTTTAGCTATGTACATGCATCTCA
CATGTAGTATAGAAATGTTAGGGCCACAGAACAAGAATTGTACTCTATAC
TATCTAATATTTCTGAAACCCCAGAATACACAGATTTGATTAGGATAATT
TAGCCACTCATATAAAAATGAACACAATAAACTAAGATTATAGTAGGCTT
TCAATATAAATATGATGTTTTACAAATAAATTATGCAGTACATATTGAGC
TTTTCACATTACATATGAGAAAATGTTTTGTGGATAATAATCAATTGCTT
AAACTTACAAAATGTGAGCATTTATACTGACATCATTCCATATGANATAA
TAAAGTACTTCACATTTTCTAAATAATAGTTATAGAANATGTTTTTTATG
AAAAATTAATTTTGTGGCATATTAACCAATCTTATCACAACTCTGGCATT
CTTCAAAGGATTTTTTTCTCT

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTGTGGACTGTATCTTGGGTATTC
TGTATTTGGGTTTTTAGGGGTGGGGGGCTCATATCCACTTATTAGTGAGT
ACATACCATGCATGTCCTTTTGTGTCTGAGCTACCTCACTCAGATTGATA
TTTTGTAGTTCCATCAATTTGCCTGCTAAACTCAGGATGCCCTCACTCTT
AATAGCTGTGTAGTATTCCATTGTGTAAATCATACACATTTTTTGTATGT
GTTCTTCTGTGAGATAGCATTTTTCTTTTTTCTGTCTATTACATATGAGG
TTGCTATGAACTCGTGCCCCCATGCCCTGCAGAGACATCTTTGGTCATAT
TCCCAGTTATTTGTTTACCCCACACCCCCCCCCATATCACTTTCCAATTT
TCCTGAATTAATTTCCTTATTTAACTTCACCAGCGTGTCTTCCACTTTTT
TTCCATCCTATCCAATTCATCACCCCTTTCCCTTTCCCCCCTCCTGCCCC
CCTTCCTCTTTCACACCACTTCCCCCTCCCCTTTTTCTTTTACCATCCTT
ACTCTCTCTTTTCCTCTTCTTCTTCCTCTCTTCTTCTATATTTTTCCCTC
CCTCTTCTTCTTTTACCCCGTTTCCCTCTCTCATATTTTTATCACTCACT
TTATCATTATTTCCCCCTATTTCCCTCCACCTTTTTTTCCCCATTCCCCA
CCATTTATTTTTTACCACACTTTCCCGTGTTAC

Query= MSMg01no328_j16.b1 MSMg01no328_j16.b1 CHROMAT_FILE:
MSMg01no328_j16.b1 PHD_FILE: MSMg01no328_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:48 2005
         (645 letters)



>mm_chrX_64538172_64539216
          Length = 1045

 Score = 1166 bits (603), Expect = 0.0
 Identities = 631/641 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctgttcctggagccttaattaaatatttttgtctgctacacacattttttaaat 64
           |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 205 gaattcctattcctggagccttaattaaatatttttgtctgctacatacattttttaaat 264

                                                                       
Query: 65  cattttattttagctctatcctttgagaactgatcagcttcatttctaatccctgtgcct 124
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgttttattttagctctatcctttgagaactgatcagcttcatttctaatccctgtgcct 324

                                                                       
Query: 125 attgttttaggtgtttctcatcttcactggcctgctttctcttctaaagtgagtatctaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attgttttaggtgtttctcatcttcactggcctgctttctcttctaaagtgagtatctaa 384

                                                                       
Query: 185 tggttctttgaccttcattaggaattttgaaatgctgttgctacattttagctatgtaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggttctttgaccttcattaggaattttgaaatgctgttgctacattttagctatgtaca 444

                                                                       
Query: 245 tgcatctcacatgtagtatagaaatgttagggccacagaacaagaattgtactctatact 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcatctcacatgtagtatagaaatgttagggccacagaacaagaattgtactctatact 504

                                                                       
Query: 305 atctaatatttctgaaaccccagaatacacagatttgattaggataatttagccactcat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atctaatatttctgaaaccccagaatacacagatttgattaggataatttagccactcat 564

                                                                       
Query: 365 ataaaaatgaacacaataaactaagattatagtaggctttcaatataaatatgatgtttt 424
           ||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 565 ataaaaatgaagagaataaactaagattatagtaggctttcaaaataaatatgatgtttt 624

                                                                       
Query: 425 acaaataaattatgcagtacatattgagcttttcacattacatatgagaaaatgttttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acaaataaattatgcagtacatattgagcttttcacattacatatgagaaaatgttttgt 684

                                                                       
Query: 485 ggataataatcaattgcttaaacttacaaaatgtgagcatttatactgacatcattccat 544
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 685 ggataataatcaattgcttaaacttacaaaatgtgagcatttataccgacatcattccat 744

                                                                       
Query: 545 atganataataaagtacttcacattttctaaataatagttatagaanatgttttttatga 604
           |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 745 atgaaataataaaatacttcacattttctaaataatagttatagaaaatgttttttatga 804

                                                    
Query: 605 aaaattaattttgtggcatattaaccaatcttatcacaact 645
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaaattaattttgtggcatattaaccaatcttatcacaact 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)