Query= MSMg01no329_l08.b1 MSMg01no329_l08.b1 CHROMAT_FILE:
MSMg01no329_l08.b1 PHD_FILE: MSMg01no329_l08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:16 2005
(336 letters)
>mm_chrX_166317982_166318716
Length = 735
Score = 545 bits (282), Expect = e-159
Identities = 310/326 (95%), Gaps = 12/326 (3%)
Strand = Plus / Minus
Query: 11 ggaattcttcacagagacacacttaagtaatcctcaagaccggtctcccttcagtacttc 70
||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 556 ggaattcttcacagagacaca-----------ctcaagaccggtctcccttcagtacttc 508
Query: 71 cgggactgtgttcttacgtccagcagcaacacaaaatacaactcctaaagtgctagaacg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cgggactgtgttcttacgtccagcagcaacacaaaatacaactcctaaagtgctagaacg 448
Query: 131 gttttttaaaaaagtctgtagcaaccccctcccccctccccgcgcctgcctccgctggaa 190
| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 447 g-tttttaaaaaagtctgtaacacccccctcccccctccccgcgcctgcctccgctggaa 389
Query: 191 gtgcagcttgttccatccagactgctttcgccttctcagcctcggacacacagtaaagtg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gtgcagcttgttccatccagactgctttcgccttctcagcctcggacacacagtaaagtg 329
Query: 251 ctcaaaatgtgaaagcaaaataagataagagtcccagcgtgcttctttgtcagactgtgc 310
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctcaaaacgtgaaagcaaaataagataagagtcccagcgtgcttctttgtcagactgtgc 269
Query: 311 agttgcctttattctaacctgaagca 336
||||| ||||||||||||||||||||
Sbjct: 268 agttgtctttattctaacctgaagca 243
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 735
Length adjustment: 9
Effective length of query: 327
Effective length of database: 726
Effective search space: 237402
Effective search space used: 237402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_l08.g1 MSMg01no329_l08.g1 CHROMAT_FILE:
MSMg01no329_l08.g1 PHD_FILE: MSMg01no329_l08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:16 2005
(338 letters)
>mm_chrX_166159740_166160477
Length = 738
Score = 611 bits (316), Expect = e-179
Identities = 331/340 (97%), Gaps = 8/340 (2%)
Strand = Plus / Plus
Query: 1 attacatcagtactttattaaatccacaaaaatatctagtgagattgcttttgactatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacatcagtactttattaaatccacaaaaatatctagtgagattgcttttgactatga 260
Query: 61 cagatactacaaaacattagataacttcagtagcataaataaatcagtgctatatggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatactacaaaacattagataacttcagtagcataaataaatcagtgctatatggtac 320
Query: 121 actagagaggttatgggaaataaactcagataataagttgaaattgataatctcaatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actagagaggttatgggaaataaactcagataataagttgaaattgataatctcaatttt 380
Query: 181 tgctttatatatatataaatatatatatat--ttatatataaacagaaaagtatatatat 238
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tgctttatatatatataaatatatatatatatttatatataaacagaaaagtatatatat 440
Query: 239 atatatatatatttctgtttgatttaaactcataaacagtataatgaagtaactattcta 298
|||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 atatat------ttctgtttgatttaaactcataaacagtataatgaagtaaccattcta 494
Query: 299 agaataagacttccagggtcctgcacatcacgggatatgt 338
||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agaataagacttccagggtcctgcacatcacgggatatgt 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
