Query= MSMg01no330_b17.b1 MSMg01no330_b17.b1 CHROMAT_FILE:
MSMg01no330_b17.b1 PHD_FILE: MSMg01no330_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:46 2005
(704 letters)
>mm_chrX_99516376_99517478
Length = 1103
Score = 1323 bits (684), Expect = 0.0
Identities = 696/700 (99%), Gaps = 1/700 (0%)
Strand = Plus / Plus
Query: 5 gaattcttagacctctctctctcaacctaaaccattaccactcatttttaaagacctaga 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttagacctccct-tctcaacctaaaccattaccactcatttttaaagacctaga 263
Query: 65 ccaaatatataacctccccgaagtctccaaaggcagaattccttcttcactccttttggc 124
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccaaatatataacctccttgaagtctccaaaggcagaattccttcttcactccttttggc 323
Query: 125 ccccacaagggctctcagcccctaggttcactctgtcttactgtttactggcatttcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccacaagggctctcagcccctaggttcactctgtcttactgtttactggcatttcttc 383
Query: 185 cctaccgagccaggagtgctgctcttaggagccagaaacacatggcacaaaggtgctctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctaccgagccaggagtgctgctcttaggagccagaaacacatggcacaaaggtgctctc 443
Query: 245 taagcacagagcaggacacagaaatggcctgaactttctctctgggtttgcacatgaccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 taagcacagagcaggacacagaaatggcctgaactttctctctgggtttgcacatgaccc 503
Query: 305 aggaggatgtccctttaggcttctggttatattatccctgcttcaacactggctgtactt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggaggatgtccctttaggcttctggttatattatccctgcttcaacactggctgtactt 563
Query: 365 gattagtaactacctcagggccagcacacagtgaaatgtcttctgccagagtggccagga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gattagtaactacctcagggccagcacacagtgaaatgtcttctgccagagtggccagga 623
Query: 425 aatatgtgaggaggttcagtcttggacagccttctggtgcaggcctcaacttagctttcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aatatgtgaggaggttcagtcttggacagccttctggtgcaggcctcaacttagctttcc 683
Query: 485 aagtgaacaaatgtgagctggaaggcacttctccccactccagccctcggctcaactctc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aagtgaacaaatgtgagctggaaggcacttctccccactccagccctcggctcaactctc 743
Query: 545 ctgtgctagcttcttaggagttgagcttgaaaattgaaaatgttatctattaccacagag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgtgctagcttcttaggagttgagcttgaaaattgaaaatgttatctattaccacagag 803
Query: 605 gaatgctttgtggatggagtctgactgggctgtggctcctacagctctggttcatcacct 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaatgctttgtggatggagtctgactgggctgtggctcctacagctctggttcatcacct 863
Query: 665 tcaactttggattcttcctctggctctgctaactatgaac 704
||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 tcaactttggattcttcctctggctctgctaactatgaac 903
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 704
Length of database: 1103
Length adjustment: 10
Effective length of query: 694
Effective length of database: 1093
Effective search space: 758542
Effective search space used: 758542
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no330_b17.g1 MSMg01no330_b17.g1 CHROMAT_FILE:
MSMg01no330_b17.g1 PHD_FILE: MSMg01no330_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:46 2005
(291 letters)
>mm_chrX_99684056_99684745
Length = 690
Score = 509 bits (263), Expect = e-148
Identities = 284/291 (97%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 ctgagattcttgcaccatggttattaattgctgattttagccagggtattcacagaagta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 490 ctgagattcttgcaccatggttattaattgctgattttagccagggtattca-agaagta 432
Query: 61 tctagtttcccgtgagtctctctttaatcaactcagcattcacaatagtctcttctgaac 120
|||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 431 tctattttcccgtgagtttctctttaatcaactcagtattcacaatagtctcttctgaac 372
Query: 121 tacacttaaaactcatgttacttgcttattttcttccttttcaattgtgaattagcttgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 371 tacacttaaaactcatgttacttgcttattttcttccttttcaattgtgaattagcttac 312
Query: 181 catattgattttttttattttgtgtgttcacttcatgacatcctgtgttttatacatgac 240
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 311 catattgattttttttattttgtgtattcacttcatgacatcctgcgttttatacatgac 252
Query: 241 tagtaactttactctgtgataaattagtattgagttgctaggtgatgtatc 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tagtaactttactctgtgataaattagtattgagttgctaggtgatgtatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
