Query= MSMg01no332_i05.b1 MSMg01no332_i05.b1 CHROMAT_FILE:
MSMg01no332_i05.b1 PHD_FILE: MSMg01no332_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:02 2005
(531 letters)
>mm_chrX_65807537_65808467
Length = 931
Score = 990 bits (512), Expect = 0.0
Identities = 526/531 (99%)
Strand = Plus / Plus
Query: 1 aacctgtcagngttgtggttttatcagactaggtgctgccagttttgcaaagctttgatc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aacctgtcagtgttgtggttttatcagactaggtgctgccagttttgcaaagctttgttc 260
Query: 61 caccttgtaagaaggataaataaataagcactaacatgtgcttggtgcttagtatttttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 caccttgtaagaaggataaataaataagcactaacatgtgcttggtgcttagtatttctg 320
Query: 121 ggtgctgagctgagtgattcatctaaacttccctatagagaaatgaactataaacaccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgctgagctgagtgattcatctaaacttccctatagagaaatgaactataaacaccag 380
Query: 181 aaagagaaagagaaagaaagtgcccagggattcctaggcatgattctctctcttaggaca 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 aaagagaaagagaaagaaagtgcccagggattcctaggcacgattctctctcttaggaca 440
Query: 241 agtttgcatggttctggcctgaggaccaggaaaggccaatataaattttagatgggcaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttgcatggttctggcctgaggaccaggaaaggccaatataaattttagatgggcaag 500
Query: 301 tgtaacatactgactgtttgtatccattcttcagtaattgtgacaaattcgtgaatatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaacatactgactgtttgtatccattcttcagtaattgtgacaaattcgtgaatatag 560
Query: 361 agtccaatctgacataatggtacaagttctaggtcatgtgataagaaaaaggaagaaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtccaatctgacataatggtacaagttctaggtcatgtgataagaaaaaggaagaaaaa 620
Query: 421 aatcagacatgtagatctatcttaacaaaatgaaaactcaaatctctattttcaaatagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcagacatgtagatctatcttaacaaaatgaaaactcaaatctctattttcaaatagc 680
Query: 481 atgctttccataatagtgatggaaatggctttaaattgagatacaacccca 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atgctttccataatagtgatggaaatggctttaaattgagatacaacccca 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_i05.g1 MSMg01no332_i05.g1 CHROMAT_FILE:
MSMg01no332_i05.g1 PHD_FILE: MSMg01no332_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:02 2005
(650 letters)
>mm_chrX_65982601_65983656
Length = 1056
Score = 1191 bits (616), Expect = 0.0
Identities = 644/656 (98%), Gaps = 6/656 (0%)
Strand = Plus / Minus
Query: 1 aatgaaatctatgtaggcacactcattgccctatcgctgaattccattgtcatgtagtac 60
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 856 aatgaaatctatgtaggcacactcattgacctattgctgaattccattgtcatgtagtac 797
Query: 61 cacttaaggaaactgcagtgcatgccaaaggt----agagtctttatgagtgctgatcag 116
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 796 cacttaaggaaactgcagtgcatgccaaaggtagtcagagtctttatgagtgctgatcag 737
Query: 117 gaagggtggggattgcaaccccttagtagagagtagatccaaagcaggcaaaatctacta 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gaagggtggggattgcaaccccttagtagagagtagatccaaagcaggcaaaatctacta 677
Query: 177 tgtccccatgtaaggagaaggagcctctaaattaatctactaacataagccagtaatgaa 236
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tgtctccatgtaaggagaaggagcctctaaattaatctactaacataagccagtaatgaa 617
Query: 237 ttttctgctgtgtgatattcaatctgaaatacttgtttgtgaacttttcaaggagcacag 296
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 616 ttttctgctgtgtgatattcaatctgaaatacatgcttgtgaacttttcaaggagcacag 557
Query: 297 gctctagaattatcaatggcttatttgtatgtgagg--aaaaaaaagcttttgtggtgat 354
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 556 gctctagaattatcaatggcttatttgtatgtgaggaaaaaaaaaagcttttgtggtgat 497
Query: 355 tttgttactatgggagaactgaacatatatcgactgggtaggtagatatcttcatgaata 414
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 496 tttgttactatgggagaactgaacatatatcgactgggtaggtagatatcatcatgaata 437
Query: 415 ggatggatggcacacaggttcacttaactttctaattccaggtattttactgcttttaga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggatggatggcacacaggttcacttaactttctaattccaggtattttactgcttttaga 377
Query: 475 atgtcatctttgctacatgattagtatagagatgtttcttgatttagcttgtggaagagg 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atgtcatctttgctacatgattagtatagagatgtttcttgatttagcttgtggaagagg 317
Query: 535 tttccaaagggagtatggcatacatttgattaatagtctcattctgggtggcctgctcaa 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tttccaaagggagtatggcatacatttgattaatagtctcattctgggtggcctgctcaa 257
Query: 595 aaagggatgctgttagcagttcataattctatagaaaagtagattgtgttcatcaa 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aaagggatgctgttagcagttcataattctatagaaaagtagattgtgttcatcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1056
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1046
Effective search space: 669440
Effective search space used: 669440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
