XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
TAAAATTCCCCAACTTTATTGTTATTCTTGAAGAAGCCTAGGTCAGCCAT
GTTCTTGAAATTGAATACACTTTTCATCAGTTAGAGGACTTGACACTTTC
TAAATGTCAATTTTGGTAAGGTTTGGGTAGGTAGATAAATTTTAGTCTGT
TACAGTCTGGATTCAAGGATTCCCTTTCATCTTCCCTGAAACTATTTTCC
TTTCATAGATCGCTCACATCGATTTACTAATTTTCTAGTTCTAGACTCTT
CTGAGGAGGAGGAATGTTAAAGATGAGATTTTCGCTGTAGAACAATATGT
TCTGTTGTTCCTCTCCTTGTTTAGTTGAGGGAATTTACTTCTATATAATT
TCTTCTGGACATGAGTATTTCTGTGTAGCAGAGAGCTGGCTTATCGTGTC
CAAGTCTCTCCGTTCATCCCCCAATGCCAGGGATTATACTACTGCTTTTC
ATATTTGACTACAGAAGCCTTCTGTACATAAATGGAGGCTGGGAGATATA
TAAAGCCACTCAAAGTTAATATTTAGATAACTTTGTTATACATAATATTA
ATTTTTTAACATCTAGTTATTAAGTCTTTAAGTTGACTATCCATAAAAAG
AGTTAAAAATTGAACAAGGATGTTACCAGTTGATATGCCACACTAGACAG
GGAAAAGCCCACGAGGTT

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACTACCCTGAGATTCCACCTCACACCAGTCAGAATGGCCAAAATCAAAAA
TTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTC
TGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTAGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCTAGATGCCCCTCAGCAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAGTATTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATA
TTAGCCCCCATCGTAGGATACCCAAGATATAAGATATAACTTGCCTAACC
CCTGATACTCACGAAGATTGAAGAC

Query= MSMg01no335_p22.b1 MSMg01no335_p22.b1 CHROMAT_FILE:
MSMg01no335_p22.b1 PHD_FILE: MSMg01no335_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:57 2005
         (653 letters)



>mm_chrX_45988753_45989806
          Length = 1054

 Score = 1168 bits (604), Expect = 0.0
 Identities = 625/632 (98%), Gaps = 1/632 (0%)
 Strand = Plus / Plus

                                                                       
Query: 23  caactttattgttattcttgaagaagcctaggtcagccatgttcttgaaattgaatacac 82
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 223 caactttattgttattcttgaagaagcctaggtcagccatgttcttgaaaatgaatacac 282

                                                                       
Query: 83  ttttcatcagttagaggacttgacactttctaaatgtcaattttggtaaggtttgggtag 142
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttttcattagttagaggacttgacactttctaaatgtcaattttggtaaggtttgggtag 342

                                                                       
Query: 143 gtagataaattttagtctgttacagtctggattcaaggattccctttcatcttccctgaa 202
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtagataaattttagtctgttacagtctggattcaaggattccctttcatcttccctgaa 402

                                                                       
Query: 203 actattttcctttcatagatcgctcacatcgatttactaattttctagttctagactctt 262
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 actattttcctttcatagatcgctcacatcgatttactaattttctagttctagactctt 462

                                                                       
Query: 263 ctgaggaggaggaatgttaaagatgagattttcgctgtagaacaatatgttctgttgttc 322
           |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 463 ctgaggaggaggaatggtaaagatgagattttcgctgtagaacaatatgtcctgttgttc 522

                                                                       
Query: 323 ctctccttgtttagttgagggaatttacttctatataatttcttctggacatgagtattt 382
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 523 ctctccttgtttagttgagggaatttacttctatataatttcttctggacatgagtatta 582

                                                                       
Query: 383 ctgtgtagcagagagctggcttatcgtgtccaagtctctccgttcatcccccaatgccag 442
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 ctgtgtagcagagagctggcttatcgtgtccaagtctctccgttcatcccccaatgccag 642

                                                                       
Query: 443 ggattatactactgctttt-catatttgactacagaagccttctgtacataaatggaggc 501
           ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 643 ggattatactactgctttttcatatttgactatagaagccttctgtacataaatggaggc 702

                                                                       
Query: 502 tgggagatatataaagccactcaaagttaatatttagataactttgttatacataatatt 561
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 tgggagatatataaagccactcaaagttaatatttagataactttgttatacataatatt 762

                                                                       
Query: 562 aattttttaacatctagttattaagtctttaagttgactatccataaaaagagttaaaaa 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 aattttttaacatctagttattaagtctttaagttgactatccataaaaagagttaaaaa 822

                                           
Query: 622 ttgaacaaggatgttaccagttgatatgccac 653
           ||||||||||||||||||||||||||||||||
Sbjct: 823 ttgaacaaggatgttaccagttgatatgccac 854


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space:   671292
Effective search space used:   671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)