XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCCATTCTCATTGTCCTCCCCATCCTCTCTCCCTCCTAGTGTCCTCCAC
CTCTCTGACTTCTAGGACTATTTTATTTCCTACTTTTACATGAGATTCAA
ACATTTTCACTTGGGTATTCCTTCTTAATTAGCTTTATTTGGGGCTGTGT
AGTATAACATGGGTATCCTATATTTTATGGCTCATATCCACTTATAGAAG
AATACATACCATGCCTGTCCTTTTGGGTCTGGGTTACCTCACTCAGGATG
ATATTCTCAAGTTTCCTCCATTTGCCTGCAAATTCATGATTTTAATAGCT
GAATAGTATTCTATTGTGTAGAACCACATCCTCTTTATCCATTCTTCAGG
TAAGGGACAGCTAGGTTGTTTTCAGGTTCTGGCTAAGACAAATAAAGCTG
CTTTAAGCATAGTGAAGGAAGACCCACTGTAGTACAGTGGAGAATCTTTA
GGGTATAAACTGGGAGTGATATAGCTGGATCTTGAGTTAGAACTATTCCT
AATTTTGTTCTTGAAGTGTGTCTCGGNCATTAAAGATTCCTTTGTTGAGA
AATTCCTTTTTTTACTCTATGCACCATTTTTGAATTGGGGAATTTGGTTT
ACTGGAGACAAAATTCTGGATTCTTTCTATATTTTGGAAATAAATGAAGA
ACATGAAAGGGACCCTGGTCCTGTTGAACTAGGGTGTAAAC

AATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCTTTAATGTGACACTATGAGTTAGGTGAGAT
GGCAAATGGAGAGAGAATTGTGTATAGATAACAAATTATGAAGAATAATA
TAGTCTGATTACACTAAACATAGTAAATAAAAGGAATGGGAAGATGATTC
ACTGGTAGAGAACTTGATGCATTTACATAGGACCTGAGATCTGTCAACTG
CACCAACTTTTAGCAGCTCACTATGCCCTGTAACTCCAGTCGTAGGAGGT
CTGACATGTTGTAGATTCCTTAGTCACTTGCATATATGAATTGCACATAA
ATTCATGGATGTATACATACATATATATCAATAAAAATAAATATTTTAGA
AGTAAATGGAAAAATATATATGTGTTAGTTTGAAAAACTATTATTATTAA
CATAGTATCTTCTAAGTCTTTGCTTAGCACAAAAATATTCAGTACTAAAG
AATATGAATGAAAAATAACAAGTGTGCATTATATTTTCAACATTTACACT
TGGATATTTTATTAAGTTCAAGATTCACAGAATCAAGCATAATCAAAGAA
ACCAAGTACTTCATTGCACATTGTGTGAAGAAAAGAAAACTCTACCTCCA
GATGTTACATAACTAAGTTATGAAAAGTTTATTCTAGCCAGGCNTATGTA
TAATCACTACTCTACCTACCAATTATTTAACTTGGATAAAN

Query= MSMg01no336_c19.g1 MSMg01no336_c19.g1 CHROMAT_FILE:
MSMg01no336_c19.g1 PHD_FILE: MSMg01no336_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:10 2005
         (547 letters)



>mm_chrX_61804131_61805077
          Length = 947

 Score = 1031 bits (533), Expect = 0.0
 Identities = 545/551 (98%), Gaps = 4/551 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttaatgtgacact----atgagttaggtgagatggcaaatggagagagaattgtgta 56
           ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tctttaatgtgacacttactatgagttaggtgagatggcaaatggagagagaattgtgta 256

                                                                       
Query: 57  tagataacaaattatgaagaataatatagtctgattacactaaacatagtaaataaaagg 116
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tagataacaaattatgaagaataatatagtctgattacactaaacatagtaaataaaagg 316

                                                                       
Query: 117 aatgggaagatgattcactggtagagaacttgatgcatttacataggacctgagatctgt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aatgggaagatgattcactggtagagaacttgatgcatttacataggacctgagatctgt 376

                                                                       
Query: 177 caactgcaccaacttttagcagctcactatgccctgtaactccagtcgtaggaggtctga 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 caactgcaccaacttttagcagctcactatgccctgtaactccagtcgtaggaggtctga 436

                                                                       
Query: 237 catgttgtagattccttagtcacttgcatatatgaattgcacataaattcatggatgtat 296
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 437 catgttgtagattccttagtcacttgcatatatgaaatgcacataaattcatggatgtat 496

                                                                       
Query: 297 acatacatatatatcaataaaaataaatattttagaagtaaatggaaaaatatatatgtg 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 acatacatatatatcaataaaaataaatattttagaagtaaatggaaaaatatatatgtg 556

                                                                       
Query: 357 ttagtttgaaaaactattattattaacatagtatcttctaagtctttgcttagcacaaaa 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttagtttgaaaaactattattattaacatagtatcttctaagtctttgcttagcacaaaa 616

                                                                       
Query: 417 atattcagtactaaagaatatgaatgaaaaataacaagtgtgcattatattttcaacatt 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atattcagtactaaagaatatgaatgaaaaataacaagtgtgcattatattttcaacatt 676

                                                                       
Query: 477 tacacttggatattttattaagttcaagattcacagaatcaagcataatcaaagaaacca 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tacacttggatattttattaagttcaagattcacagaatcaagcataatcaaagaaacca 736

                      
Query: 537 agtacttcatt 547
           || ||||||||
Sbjct: 737 aggacttcatt 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)