TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTACATCATACTTGTTTAAATAAATATATTCCAGTGAATCCATTGCAAA
TAAGTATATACCAGTGAATCCATTGCTAGTAAAAATAAATAACATAGCTA
AAATCCTCACAAATACCACCCAATTAACATATTTTAGCCATTCCTTTAAT
CCCTTTGTAACCATTGAGCTATTGTCTCTCACAGCAGGTTAATTTGAAAT
TTCTAGAATTTTATACAAGCATAATTATCAACTATAGAATTTGGCTGGTC
TGTGTGCTATGATTTACTATCATGCTACCTATTTGCAGTTTAGAAGTTAT
ATGATTTCTATGTGAATATGCACTCACATTAAATGAATAAATAGAATGCT
ACCCTCTGATTGTGTTTCAGGTTCAGGAATGGACTTATGACTATATTACT
CTGCAGGTTTCAAATCACGTTAATATTTGGCACTTGCTGCTTTATTTTTA
ACTAATCTGCTTTACAAGTTCACCATCTACCAATTTCCTAAAATATGTGA
TTCACTACATGAGCACAAAAAAGATTTAGTANAGATCTCAGTGTTCAAAC
TGTTACACATATTTATTATTATCATAAAATATTATACTACTCTTCACCAT
TTTGTGTGATCAACCAAATGATCTCTACCAATTGATCAAATAAACTCAAG
GAACTATGCAAATATCTGAAACATATTCATGG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAGGATAGACAAGGTTATGTGGAGACACCT
TATCTATCAAACAAACAAGTAAGTAAATAAATATATTTTTAAAATTAAAA
AATAAAAGACAAAGAAGTTAATGAAGAAAGGATAGAATAGCAAATGAAAG
GAAAGCAAAAGGAGAAAAAATAATCTACAGTGGAAGATCTTAAAGGCCCC
AGGGGTCATCCTACTATTATTATTTTATTGTCACAATATATCAAAGTGTT
TTCTAAATATGTATATCAGTAACTGTCTATTATTACAGGACTCATCAGAG
ACGTTTCTTTGCACAGTGGACAGTATTTAAGGAATAAATTCACAATTGGT
CAAGGTACAGAGAATGAGTGTTAATGGAATACTCAGGCAAAAATGGTACA
AATGGCACATCAACATAACATGTTCTTCCTTAATGGTTCAGGAACCATAT
TGTCAGAGGGAGTAGAAAAAAACTTAAAAGCCAGTTGTAAAAGAGGACCA
GAACTAAGCAGTAGCCTCTGAATATAACAGAATGACTGTACTCACAAACT
CATAGTGCCCGTGAGTACCTACACAAAATTAAATAAGATCAAACAGTANA
TATTTTACATGCAGTGGGAAGGCAGNTAATAGCCTCAATCATTAGCTGAA
GAGCTATTGGTATTTTATGGCATCTGGGGGAGAGAAAATCTAT

Query= MSMg01no336_l16.b1 MSMg01no336_l16.b1 CHROMAT_FILE:
MSMg01no336_l16.b1 PHD_FILE: MSMg01no336_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:52 2005
         (616 letters)



>mm_chrX_81223597_81224612
          Length = 1016

 Score = 1162 bits (601), Expect = 0.0
 Identities = 609/612 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctacatcatacttgtttaaataaatatattccagtgaatccattgcaaataagta 64
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacataatacttgtttaaataaatatattccagtgaatccattgcaaataagta 264

                                                                       
Query: 65  tataccagtgaatccattgctagtaaaaataaataacatagctaaaatcctcacaaatac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 tataccagtgaatccattgctagtaaaaataaataacatagctaaaatcctcacacatac 324

                                                                       
Query: 125 cacccaattaacatattttagccattcctttaatccctttgtaaccattgagctattgtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacccaattaacatattttagccattcctttaatccctttgtaaccattgagctattgtc 384

                                                                       
Query: 185 tctcacagcaggttaatttgaaatttctagaattttatacaagcataattatcaactata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctcacagcaggttaatttgaaatttctagaattttatacaagcataattatcaactata 444

                                                                       
Query: 245 gaatttggctggtctgtgtgctatgatttactatcatgctacctatttgcagtttagaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatttggctggtctgtgtgctatgatttactatcatgctacctatttgcagtttagaag 504

                                                                       
Query: 305 ttatatgatttctatgtgaatatgcactcacattaaatgaataaatagaatgctaccctc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttatatgatttctatgtgaatatgcactcacattaaatgaataaatagaatgctaccctc 564

                                                                       
Query: 365 tgattgtgtttcaggttcaggaatggacttatgactatattactctgcaggtttcaaatc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgattgtgtttcaggttcaggaatggacttatgactatattactctgcaggtttcaaatc 624

                                                                       
Query: 425 acgttaatatttggcacttgctgctttatttttaactaatctgctttacaagttcaccat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acgttaatatttggcacttgctgctttatttttaactaatctgctttacaagttcaccat 684

                                                                       
Query: 485 ctaccaatttcctaaaatatgtgattcactacatgagcacaaaaaagatttagtanagat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 685 ctaccaatttcctaaaatatgtgattcactacatgagcacaaaaaagatttagtaaagat 744

                                                                       
Query: 545 ctcagtgttcaaactgttacacatatttattattatcataaaatattatactactcttca 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcagtgttcaaactgttacacatatttattattatcataaaatattatactactcttca 804

                       
Query: 605 ccattttgtgtg 616
           ||||||||||||
Sbjct: 805 ccattttgtgtg 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)