Query= MSMg01no337_b17.b1 MSMg01no337_b17.b1 CHROMAT_FILE:
MSMg01no337_b17.b1 PHD_FILE: MSMg01no337_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:22 2005
(621 letters)
>mm_chrX_123688353_123689373
Length = 1021
Score = 938 bits (485), Expect = 0.0
Identities = 519/535 (97%), Gaps = 8/535 (1%)
Strand = Plus / Minus
Query: 5 gaattctttaccttcttctcagtcaaaacttgtttttaaactaaattatccttggttctg 64
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 527 gaattctttaccttgttctcagtcaaaactcgtttttaaactaaattatccttggttctg 468
Query: 65 ccccatcagagccaacccagaaggtaaatctggtttcatatactacttctttaaatggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccccatcagagccaacccagaaggtaaatctggtttcatatactacttctttaaatggag 408
Query: 125 aatttctttgaaactatacataatggcatgacaaacttagtcactcgcatattctacaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aatttctttgaaactatacataatggcatgacaaacttagtcactcgcatattctacaaa 348
Query: 185 tgcatcaactggaattgtcaattcatcctccctcttgcagaggcctactccagctcttct 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgcatcaaatggaattgtcaattcatcctccctcttgcagaggcctactccagctcttct 288
Query: 245 ggttctctcttcaaggtaggtgggggggatatcaatgaattcaagatttgattttgcaac 304
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 287 ggttctctcttcaaggtaggtgggggggatatcaatggagtcaagatttgattttgcaac 228
Query: 305 atatttatatttgcttttaaaaaattaattattttatttatgtacatttcaaatgttgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atatttatatttgcttttaaaaaattaattattttatttatgtacatttcaaatgttgtc 168
Query: 365 cttcttcctagtcccccccaaagagctccctgctccatccccactacccttcacctctaa 424
| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 167 cctcttcctagtccccctcaaagagctctctgctccatccccactacccttcacctctaa 108
Query: 425 gaagttgcttacacacacagacacacacacacacacacacctacctcacccttctagcat 484
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 107 gaagttgcttacacacacag--------acacacacacacctacctcacccttctagcat 56
Query: 485 ccccttttactggggcatcaagcctccacaggaccaagcatatcccctcccactg 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55 ccccttttactggggcatcaagcctccacaggaccaagcatatcccctcccactg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_b17.g1 MSMg01no337_b17.g1 CHROMAT_FILE:
MSMg01no337_b17.g1 PHD_FILE: MSMg01no337_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:22 2005
(478 letters)
>mm_chrX_123503814_123504691
Length = 878
Score = 893 bits (462), Expect = 0.0
Identities = 474/478 (99%)
Strand = Plus / Plus
Query: 1 tgaaatctcatcaaggcaatcttgcatttcttgggataaataatgatagtaagtttgaga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 tgaaatctcatcaaggcaatcttgcatttcttgtgataaataatgatagtaagtttgaga 260
Query: 61 tgtgggtaaatccactacacttattctaattcttactattatttctagggccataagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgggtaaatccactacacttattctaattcttactattatttctagggccataagatg 320
Query: 121 gagaatgaagattctttttctgcattaatggccagttaacaagacaagaaaactggttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaatgaagattctttttctgcattaatggccagttaacaagacaagaaaactggttgt 380
Query: 181 taggagttatgtctctgttgcagaatgagtgaattaggatataggatacagtcatgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggagttatgtctctgttgcagaatgagtgaattaggatataggatacagtcatgtttg 440
Query: 241 tgagaagatatagacagtctgcactctcacacttctaatatgctatttggggaaaaaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgagaagatatagacagtctgcactctcacacttctaatatgctatttggggaaaaaagg 500
Query: 301 tgttagagtgaagtaagaatacattaatttttctaagaaaaaaatgggaggtttgaataa 360
|| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 tggtagagtgaagtaagcatacatgaatttttctaagaaaaaaatgggaggtttgaataa 560
Query: 361 tagctgtttgaagctggcacagaggaaatacagtgttaagggtaatgttcattataaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagctgtttgaagctggcacagaggaaatacagtgttaagggtaatgttcattataaagc 620
Query: 421 tcttttaaaagtgtggtagtagatagtttgaagacatcatggtaagacatgcatgcga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcttttaaaagtgtggtagtagatagtttgaagacatcatggtaagacatgcatgcga 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
