Query= MSMg01no340_a01.b1 MSMg01no340_a01.b1 CHROMAT_FILE:
MSMg01no340_a01.b1 PHD_FILE: MSMg01no340_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:57 2005
(615 letters)
>mm_chrX_165381075_165382089
Length = 1015
Score = 1116 bits (577), Expect = 0.0
Identities = 611/643 (95%), Gaps = 32/643 (4%)
Strand = Plus / Plus
Query: 5 gaattccttgccccttgacttgctttggcgagtagataagacagatgtggcagcctgctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gaattccttgccccttgacttgctttggcgagtagataagacagatgtggcagcctgctg 232
Query: 65 gtttcaaggctaagcactaagaggccttgcctggagtctgcttgttctcttgagactctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gtttcaaggctaagcactaagaggccttgcctggagtctgcttgttctcttgagactctg 292
Query: 125 ccaagaaagagttgcctggactaactcacgttcttgagtggaggatgagtaatatgcaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ccaagaaagagttgcctggactaactcacgttcttgagtggaggatgagtaatatgcaga 352
Query: 185 ggatggcccagctagatcatctagccccaagcgacttggagacgggtgaactaacctaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ggatggcccagctagatcatctagccccaagcgacttggagacgggtgaactaacctaat 412
Query: 245 gcccactgttttagtgtgatatgtccctgaaatgtcatgtttttcttttgttcatattgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gcccactgttttagtgtgatatgtccctgaaatgtcatgtttttcttttgttcatattgt 472
Query: 305 tatatgtcataaattttgaattttggagagaaaaatgcattgaagaccatggctaggaga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tatatgtcataaattttgaattttggagagaaaaatgcattgaagaccatggctaggaga 532
Query: 365 atagaagctgaagcttgaatgtgaataggaga---------------------------- 396
||||||||||||||||||||||||||||||||
Sbjct: 533 atagaagctgaagcttgaatgtgaataggagaatagaagctgaagcttgaatgtgaatag 592
Query: 397 ----ccctgttggacagtataatctggaagtgtttacatctgtgcttctgaggaagagtg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gagaccctgttggacagtataatctggaagtgtttacatctgtgcttctgaggaagagtg 652
Query: 453 gagaagatgacaaagaaagcaagctacagtacaggaaaacaaaacaaagccatgatcttt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gagaagatgacaaagaaagcaagctacagtacaggaaaacaaaacaaagccatgatcttt 712
Query: 513 ggaactggaaaacctgtgtttaaatgtcatttttatttattacaagcaatgtggctttga 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ggaactggaaaacctgtgtttaaatgtcatttttatttattacaagcaatgtggctttga 772
Query: 573 gcaagaggttgacatttcctctgcctcagttttctcatctgct 615
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gcaagaggttgacatttcctctgcctcagttttctcatctgct 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_a01.g1 MSMg01no340_a01.g1 CHROMAT_FILE:
MSMg01no340_a01.g1 PHD_FILE: MSMg01no340_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:57 2005
(598 letters)
>mm_chrX_165546378_165547375
Length = 998
Score = 1125 bits (582), Expect = 0.0
Identities = 594/598 (99%)
Strand = Plus / Minus
Query: 1 cagggataaaactgagatataaaaattcaggcttgactaggcttgtctatggaaccatct 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 798 cagggataaaactgagatataaaaattcagccttgactaggcttgtctatggaaccatct 739
Query: 61 caccccaccccccaattgctatttaatcactttagtcggtacatatctcaatgactgtct 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 caccccaccccccaatcgctatttaatcactttagtcggtacatatctcaatgactgtct 679
Query: 121 ttagaatattaagcaatgtggattactagaatgatgtattgttatctttgggcccaaaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttagaatattaagcaatgtggattactagaatgatgtattgttatctttgggcccaaaat 619
Query: 181 aaaaagtagtaaaacaattacaaaattcattgcatatattagattcccaatcattaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 aaaaagtagtaaaacaattacaaaattcattgcatatattagattcccaatcattaaaag 559
Query: 241 acctttgttcatttatatcgaatgtagaaagtcacattgcatttctccattaggtagtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 acctttgttcatttatatcgaatgtagaaagtcacattgcatttctccattaggtagtca 499
Query: 301 aaataaacaattacaatggttttgattattgtttttgtcatttactggaactgtgatata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aaataaacaattacaatggttttgattattgtttttgtcatttactggaactgtgatata 439
Query: 361 cagcaaacaattcacactgaaagatcagcttctttttatattaggggcaataagctggat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 cagcaaacaattcacactgaaagatcagcttctttttatattaggggcaataagctggat 379
Query: 421 agattacccaggagttaaggatacatagtgctgttgtaaaagactcaagattagttcaag 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 378 agattacccaggagttaaggatacatactgctgttgtaaaagactcaagattagttcaag 319
Query: 481 gactcatagtgggcgattcaaaaccacctatattgccccattcaaaggacctggtgcctg 540
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gacccatagtgggcgattcaaaaccacctatattgccccattcaaaggacctggtgcctg 259
Query: 541 ctctctgtgggcacattcactcatgtatacatacccacaaatagatacaaagacctac 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctctctgtgggcacattcactcatgtatacatacccacaaatagatacaaagacctac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
