Query= MSMg01no341_b07.b1 MSMg01no341_b07.b1 CHROMAT_FILE:
MSMg01no341_b07.b1 PHD_FILE: MSMg01no341_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:14 2005
(433 letters)
>mm_chrX_6187148_6187980
Length = 833
Score = 799 bits (413), Expect = 0.0
Identities = 425/429 (99%)
Strand = Plus / Minus
Query: 5 gaattctcagttccttctccagcaacatgtctaccttcatgctgccatgcctccctccat 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 794 gaattctcagttccttctccagcaacatgtctaccttcatgctgccatgcttccctccat 735
Query: 65 gacaataaaggactaaacttttaaaactgtaagcaagccccaattaaaagttttcctata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gacaataaaggactaaacttttaaaactgtaagcaagccccaattaaaagttttcctata 675
Query: 125 agagttgccttggtcatggtgtctgtttacagcaatagaacgcaaagacaaagctgtact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agagttgccttggtcatggtgtctgtttacagcaatagaacgcaaagacaaagctgtact 615
Query: 185 aatgaatctaatgtaatatgtgtaagtatatgataatgtaataagtatttgatatgtgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aatgaatctaatgtaatatgtgtaagtatatgataatgtaataagtatttgatatgtgta 555
Query: 245 ggtaagtgtatgatacacttgaaaaaattttctttatgaattctgttactatgtgcaatc 304
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggtaagtgtatgctacacttgaagaaattttctttatgaattctgttactatgtgcaatc 495
Query: 305 aatatacatctataaaaagtggacatagaaattcaaaatatttagtaacattcaaggtta 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatagacatctataaaaagtggacatagaaattcaaaatatttagtaacattcaaggtta 435
Query: 365 acataaagcataaaactgatgttatatacttccctgcctggagcttaatgtattcagaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 acataaagcataaaactgatgttatatacttccctgcctggagcttaatgtattcagaaa 375
Query: 425 acacacagc 433
|||||||||
Sbjct: 374 acacacagc 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_b07.g1 MSMg01no341_b07.g1 CHROMAT_FILE:
MSMg01no341_b07.g1 PHD_FILE: MSMg01no341_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:14 2005
(470 letters)
>mm_chrX_6099656_6100525
Length = 870
Score = 886 bits (458), Expect = 0.0
Identities = 467/470 (99%)
Strand = Plus / Plus
Query: 1 tgatttgctgggtaaacaattaggggcagccaatatctgagcagaaaacatagcgcttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tgatttgctgggtaaacaattaggggcagccaatatctgagcagaaaacatggcgcttgg 260
Query: 61 tgagatgctggttgtagacaggcaaatgcactggtggagtgtgaataccatcagagacgt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tgagatgctggttgtagacaggcaaatgcactagtggagtgtgaataccatcagagacgt 320
Query: 121 ttgagtttactcccacagatgaatgtgaagatgcagggttttaactgctcaccttgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgagtttactcccacagatgaatgtgaagatgcagggttttaactgctcaccttgtctt 380
Query: 181 cattctctctactggcactagctgccactacagagcctcacttaggagtggctatagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattctctctactggcactagctgccactacagagcctcacttaggagtggctatagtta 440
Query: 241 taaacttggagatagcaggggcctttggttttcatgatatgaaaggcacgatggcttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaacttggagatagcaggggcctttggttttcatgatatgaaaggcacgatggcttgca 500
Query: 301 gtacctaccttcctttctaccttttcagcacctccacttcagccctttctgcttgaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtacctaccttcctttctaccttttcagcacctccacttcagccctttctgcttgaggca 560
Query: 361 ttcaatgcataatttatgaagtggtgctgccctcttgtggaaaacttaaccttcccttct 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ttcaatgcataatttatgaagtggtgctgccctcttgtggaaaacttaactttcccttct 620
Query: 421 gacctgctgtgggcagggtgtaggaagctatagttactaattttttagtc 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacctgctgtgggcagggtgtaggaagctatagttactaattttttagtc 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
