Query= MSMg01no341_m14.b1 MSMg01no341_m14.b1 CHROMAT_FILE:
MSMg01no341_m14.b1 PHD_FILE: MSMg01no341_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:07 2005
(399 letters)
>mm_chrX_134116005_134116803
Length = 799
Score = 698 bits (361), Expect = 0.0
Identities = 383/395 (96%), Gaps = 8/395 (2%)
Strand = Plus / Minus
Query: 5 gaattctctgatgacacccagacaaggattagcacatttctccactgcttcaattagcac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gaattctctgatgaaacccagacaaggattagcacatttctccactgcttcaattagcac 470
Query: 65 actgagcacatcttgaagaaattatgcatataaattcttgacttccagcttcatttgagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 actgagcacatcttgaagaaattatgcatataaattcttgacttccagcttcatttgagc 410
Query: 125 atagaatgctacctactcttctgtttttactaatggcctctttcctccaaattcttaagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 atagaatgctacctactcttctgtttttactaatggcctctttcctccaaattcttaagt 350
Query: 185 tatacttagataattcaaaactgtttaccaattccctcccaatttaatctcaaaaaatga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tatacttagataattcaaaactgtttaccaattccctcccaatttaatctcaaaaaatga 290
Query: 245 tgactggtacttcacagagagaacagaagcccaacacaagcttttgtcacccttttcaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tgactggtacttcacagagagaacagaagcccaacacaagcttttgtcacccttttcaat 230
Query: 305 aataccacaaatgtgcataagtgtactctctctgtgtctactctctctctctctctctct 364
|||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 229 aataccacaaatgtgcataagtgtactctctctgtgtcta--------ctctctctctat 178
Query: 365 ctctgtgtgtgtgtgtgtgtgtgtgtgtgttgttt 399
| ||||||||||||||||||||||||||||||||
Sbjct: 177 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgttt 143
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_m14.g1 MSMg01no341_m14.g1 CHROMAT_FILE:
MSMg01no341_m14.g1 PHD_FILE: MSMg01no341_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:07 2005
(434 letters)
>mm_chrX_133998338_133999171
Length = 834
Score = 824 bits (426), Expect = 0.0
Identities = 432/434 (99%)
Strand = Plus / Plus
Query: 1 attttttggagggggagggtcagtctaaatattagtatccagaaaatacatatatgctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttttggagggggagggtcagtctaaatattagtatccagaaaatacatatatgctca 260
Query: 61 ttagcactgttattgctgatttatcccttttatctcatactacaagtgtgggctatcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttagcactgttattgctgatttatcccttttatctcatactacaagtgtgggctatcttg 320
Query: 121 tgcactgcaaatttacctttaaagagagaaaggatgaaactgtatatatacttcctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcactgcaaatttacctttaaagagagaaaggatgaaactgtatatatacttcctttct 380
Query: 181 acatattttcacatgcaaacaggtgttttctttattctctttttctgtgcactgagagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatattttcacatgcaaacaggtgttttctttattctctttttctgtgcactgagagct 440
Query: 241 agttttatactgtggcttcaaagtcagagatagacagacatatttgcatcaacagcaatt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttttaaactgtggcttcaaagtcagagatagacagacatatttgcatcaacagcaatt 500
Query: 301 ctcaaactatggtactcagctcagtagcatccacatcaccttggagtttgtcaaatatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcaaactatggtactcagctcagtagcatccacatcaccttggagtttgtcaaatatgc 560
Query: 361 aaatattcaacaccctgcatcctgtagacctactgaatcacaacttctggtgggttcagc 420
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatactcaacaccctgcatcctgtagacctactgaatcacaacttctggtgggttcagc 620
Query: 421 attctgttttaaca 434
||||||||||||||
Sbjct: 621 attctgttttaaca 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
