Query= MSMg01no341_o12.b1 MSMg01no341_o12.b1 CHROMAT_FILE:
MSMg01no341_o12.b1 PHD_FILE: MSMg01no341_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:16 2005
(466 letters)
>mm_chrX_126738362_126739231
Length = 870
Score = 656 bits (339), Expect = 0.0
Identities = 351/357 (98%), Gaps = 4/357 (1%)
Strand = Plus / Plus
Query: 114 ggcttcctctttcaacatttactttttttatttaaacagcttaatcgagggctataaaaa 173
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 314 ggcttcctctttcaacatttactttttttatttaaacagcttaattgagggctataaaaa 373
Query: 174 cactggatcagtctttccaaataaaaatgaaatgcacctgccatgggttagttttactgt 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 cactggatcagtctttccaaataaaaatgaaatgcacctgccatgggttagttttactgt 433
Query: 234 agaaaccaatcctgctacctgtaggcagtttaggtgttcaaatgatcttttttttttttt 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agaaaccaatcctgctacctgtaggcagtttaggtgttcaaatgatcttttttttttttt 493
Query: 294 ----aaatgccaaaagatttgatttggtattacagggttatagctttgagttgtgaattt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttttaaatgccaaaagatttgatttggtattacagggttatagctttgagttgtgaattt 553
Query: 350 gtaaaagtgtgacgattcttttgcttactgggtttgaaataccaaaacagttatgagatt 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gtaaaagtgtgacgattcttttgcttactgggtttgaaataccaaaacagttatgagatt 613
Query: 410 tgaattgttggtactttttcaaacgatttattttaattaggatgtaaatatacgcgt 466
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 614 tgaattgttggtactttttcaaatgatttattttaattaggatgtaaatatacgcgt 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 870
Length adjustment: 10
Effective length of query: 456
Effective length of database: 860
Effective search space: 392160
Effective search space used: 392160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_o12.g1 MSMg01no341_o12.g1 CHROMAT_FILE:
MSMg01no341_o12.g1 PHD_FILE: MSMg01no341_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:16 2005
(451 letters)
>mm_chrX_126927400_126928250
Length = 851
Score = 857 bits (443), Expect = 0.0
Identities = 449/451 (99%)
Strand = Plus / Minus
Query: 1 ctgttctctgcagaagccctgtgagacagaggtatgattcagccagtatctctaaaggca 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 651 ctgttctctgcagaagccctgtgagacagaggtatgattcagccagcatctctaaaggca 592
Query: 61 tgaaagagaacggcaacacctcagataataaagtaggcagaccttgctggatgtggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tgaaagagaacggcaacacctcagataataaagtaggcagaccttgctggatgtggtttg 532
Query: 121 agaagcttaaaagctttgtgctctttgcttatgaacaccagctccatttccttgtgctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 agaagcttaaaagctttgtgctctttgcttatgaacaccagctccatttccttgtgctct 472
Query: 181 tagttcacgactgttgctgttaatggagtccactagggagactgataacttgtgaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tagttcacgactgttgctgttaatggagtccactagggagactgataacttgtgaacaaa 412
Query: 241 ctctccatgtggctcaaaagggaaagatgtgttcctgggcaggaagtaatatgctcactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ctctccatgtggctcaaaagggaaagatgtgttcctgggcaggaagtaatatgctcactg 352
Query: 301 ttcacaaaaatgtatctatgactatcttctgctcactaaagcaagagccggcactattaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttcacaaaaatgtatctatgactatcttctgctcactaaagcaagagccggcactattaa 292
Query: 361 taaaagacataaagggcaaaagcaatggaatattttaacttaataatcaattaaacccta 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 taaaagacacaaagggcaaaagcaatggaatattttaacttaataatcaattaaacccta 232
Query: 421 gtaaagtaatttgcttttctgaaatatggaa 451
|||||||||||||||||||||||||||||||
Sbjct: 231 gtaaagtaatttgcttttctgaaatatggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
