Query= MSMg01no342_f14.b1 MSMg01no342_f14.b1 CHROMAT_FILE:
MSMg01no342_f14.b1 PHD_FILE: MSMg01no342_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:50 2005
(477 letters)
>mm_chrX_130614624_130615501
Length = 878
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%), Gaps = 1/474 (0%)
Strand = Plus / Plus
Query: 5 ggaattctgtattctctttcctttctttgtac-cataggtaccagtcatgcagggagcag 63
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 ggaattctgtatgctctttcctttctttgtacacataggtaccagtcatgcagggagcag 264
Query: 64 gcatgcaaggagcaagcatgcaaggtggaagccagcctggtggctttagtcctggacaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcatgcaaggagcaagcatgcaaggtggaagccagcctggtggctttagtcctggacaga 324
Query: 124 gccaagtcacaccccaggatcatgagaaggtaagcaacactatctgactgcctccctgca 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 325 gccaagtcacaccccaggatcatgagaaggtaagcaacactatccgactgcctccctgca 384
Query: 184 caccaatctagtctttttgatcttttcgcagttaccgtgaagatcctgggtcttcaaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caccaatctagtctttttgatcttttcgcagttaccgtgaagatcctgggtcttcaaaat 444
Query: 244 ccctttggaggtgatgtttactctaacttggtactctttaatgaatttggctgagcattt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccctttggaggtgatgtttactctaacttggtactctttaatgaatttggctgagcattt 504
Query: 304 tggggacctgctcctaaagtttttaagtgaatataactggcaacttattttatatttcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggggacctgctcctaaagtttttaagtgaatataactggcaacttattttatatttcag 564
Query: 364 actcatctaaaaatggcagattttttctgtgcaagccaactgacctgaaaatccaagctc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 actcatctaaaaatggcagattttttctgtgcaagccaactgacctgaaaatccaagctc 624
Query: 424 ctttctgtcccctcctctaccatttctacccaatccgtacagaaacaatagcag 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctttctgtcccctcctctaccatttctacccaatccgtacagaaacaatagcag 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_f14.g1 MSMg01no342_f14.g1 CHROMAT_FILE:
MSMg01no342_f14.g1 PHD_FILE: MSMg01no342_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:51 2005
(466 letters)
>mm_chrX_130803709_130804574
Length = 866
Score = 563 bits (291), Expect = e-164
Identities = 309/315 (98%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 153 tttcttcttacccaggaacactagcccttggc-tggtactgtccacagaggtctgggctc 211
||||||||||||||||||||||||||||| || || |||||||||||||| |||||||||
Sbjct: 866 tttcttcttacccaggaacactagccctt-gcttgatactgtccacagagatctgggctc 808
Query: 212 ttcggcatcaatcaagaaaatgcaccattggctttcctacaggccagtctgaatgggggc 271
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 ttctgcatcaatcaagaaaatgcaccattggctttcctacaggccagtctgaatgggggc 748
Query: 272 attttctcacttgagagtcctcttcccagaataccctagtgtttgtgtcaaactgataaa 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 attttctcacttgagagtcctcttcccagaataccctagtgtttgtgtcaaactgataaa 688
Query: 332 caaacgaccctaagtagcacataccctaaggtaaacagacagaagggacggatgccctgt 391
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 caaacgaccctaaatagcacataccctaaggtaaacagacagaagggacggatgccctgt 628
Query: 392 aatgaaggaggagggactccctattcgaacagtctgataacagcactgacagacacagtg 451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 aatgaaggaggagggactccctattcgaacagtctgataacagcactgacagacacagtg 568
Query: 452 ccttccactgcgttt 466
|||||||||||||||
Sbjct: 567 ccttccactgcgttt 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
