XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTGT
TTCGCTCTGTACCCCCATTTTGTAATAGTGTTATTTGGTTTTCTGGAGTC
TAACTTTTCTAGTTCTTTGTATATATTGGAAATTGGCCCTCTATCTCTTT
AGAATAGGTAAAGATCTTTTCCCAATATGTTGGTTGCCTTTTTGTCTTAT
TGACAGTGTCCTTTGCCTTATAGAAGCTTTGTAACTTTATGAGGTCCCAT
TTGTTAATTCTTGATCTTATGGCACAAGCCACTGGTGTTCTGTTCAGGGG
TCTTTCCCCTGTGCCCATATCTTTGAGTCTTTTCGCCACTTTCTCCTATA
TATATGTTTTTTTTTGTCTCTGGTTTTTTGTGGAGTTCCTTGATCCACTT
AAGCTTGAGCTTTATACAAGGAGATAACAATAAATCAATTCATAGTCTTG
TACATGCTAACTGCCAGTTAGTTGAACCAGCACCATTTGTTAAAAATGCT
GTTCACCCCCACACACACACCCCGGGGCCCACCACTTGATGGTTTTAGTT
CGTTTGGCAAAGATCCAGGGACCATAGAATGAAGGGATTTTTTTCTGAGC
TTCTTTTTCTTTTTTTTTGGCCGGCCTGTCCGGGGTTGTTACCATACCAT
GCCCTAATTTCCCTTCGTTCCGTGGATTACCTTTGTAACCTCAAGTGTGG
GGCGTCTCCCCACACGCCCTTTTTTTTTTGACTAAAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTATCCATGCTCAAACTCAATGCATCCTCCATCAAAG
TATCAGCCAACTAGTTTGTATGCATTAATAAAATGATTATAAAATCTACC
TGGAGGAAAAAAGACTCAGAAGGGCCAACTAGTACCTAAGAAGACAGACA
TGCAGGGCTTGATGTTTATGTACCTAAATTCAAAGATAAGGAAAGACATA
GTAAAGAATATCAGTAGCACACAGGAAAGAAAATCAACTATGTTAGATAA
TATGAAAACTTGGACCAAGTGTTGGAAATGAGAATTGAAGCAGAAGACAC
AGCCACTCATCTCTTTTTTTTCACTTGACACACTTTACTTAAACATTTTT
AAATTGTTCTATTAATTATTCAGGACAGAAATAATTTAAAAAAACCATGT
TCTCCTCAAAGTAACATTTAGAANAAACATTAAAAAATGAGTTGATGGGA
AGATAATGACTTANAAAGGTGTAAGAGAAAAATCATCTACAAAGCACCAT
GAGGGATGAAAGTATATTTCTACAAATAGTTGACAGAATTGGGGAACATA
ACTTCTTTAAAGTTTGTGATTTCTTTTCCCACTTCTTTGACTAACCCAAA
CTTTTTTATAAAATGGCTACAATTCCAATTTAGGCCCTTGGGAAAGGCCC
AGGGGGAATGGTTGGTCCAAAAAAGAAGCC

Query= MSMg01no342_h13.g1 MSMg01no342_h13.g1 CHROMAT_FILE:
MSMg01no342_h13.g1 PHD_FILE: MSMg01no342_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:00 2005
         (449 letters)



>mm_chrX_115186697_115187547
          Length = 851

 Score =  849 bits (439), Expect = 0.0
 Identities = 448/452 (99%), Gaps = 3/452 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatccatgctcaaactcaatgcatcctccatcaaagtatcagccaactagtttgtatgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tatccatgctcaaactcaatgcatcctccatcaaagtatcagccaactagtttgtatgca 729

                                                                       
Query: 61  ttaataaaatgattataaaatctacctggaggaaaaaagactcagaagggccaac-tagt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 728 ttaataaaatgattataaaatctacctggaggaaaaaagactcagaagggccaacatagt 669

                                                                       
Query: 120 acctaagaagacagacatgcagggcttgatgtttatgtacctaaattcaaagataaggaa 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 acctaagaagacagacatgcagggcttgatgtttatgtacctaaattcaaagataaggaa 609

                                                                       
Query: 180 agacatagtaaagaatatcagtagcacacaggaaagaaaatcaactatgttagataatat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agacatagtaaagaatatcagtagcacacaggaaagaaaatcaactatgttagataatat 549

                                                                       
Query: 240 gaaaacttggaccaagtgttggaaatgagaattgaagcagaagacacagccactcatctc 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaaaacttggaccaagtgttggaaatgagaattgaagcagaagacacagccactcatctc 489

                                                                       
Query: 300 --ttttttttcacttgacacactttacttaaacatttttaaattgttctattaattattc 357
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttttttttttcacttgacacactttacttaaacatttttaaattgttctattaattattc 429

                                                                       
Query: 358 aggacagaaataatttaaaaaaaccatgttctcctcaaagtaacatttagaanaaacatt 417
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 428 aggacagaaataatttaaaaaaaccatgttctcctcaaagtaacatttagaaaaaacatt 369

                                           
Query: 418 aaaaaatgagttgatgggaagataatgactta 449
           ||||||||||||||||||||||||||||||||
Sbjct: 368 aaaaaatgagttgatgggaagataatgactta 337


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 851
Length adjustment: 10
Effective length of query: 439
Effective length of database: 841
Effective search space:   369199
Effective search space used:   369199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)