GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAAAACACT
CCAGGCATTCTTCTCTGGTAAGGTTCAGACCTACAGCTTAAGAACCACAG
ATCTTCTAAACTACTGTATGTACCAAGGGGACTTCTGATCTGCCCATTCT
GAACCAGGGATCCTCAGATCATCCCCAATAGCCTAAGTGAACTTCAACTT
AACTGTTTAGAACCAATGTGCTGGGGTTGGAGAGATGGCTCAGCAGTTAT
AAACACTGACTGCTCTACCACAGGTCCTGAGTTCAATTCTCAGTAACCAC
GTGTTGTCTCACAACCATCTGTCATGGGACCCGATGCCACCTTATGGTGT
GTCTGAAGACAATATCAGTATACCCACACACATGAAAAATAACCGATGTG
ACTCACAACTTCCACCAATAACTCAAGGGGGTTTCAGATGTAACCCCTGA
AATCAAATATGTTAGAAACTCCCCAGTATTGAAGGCAGCATTAACATATG
AGAACCAGAAACCTCAGAAATTCTTTAATTCCCCTCAGAATTACCTCTTA
AGAACAAAGGTGTCACATAGGTCCTCAATAACTGAAGATGCCCTGATCCA
TATGACATGATAAACAAAGGACTTCAGACCTCAACAACATTTTAAGAAGG
CCACGAAGATGGCTCTTTTACTATCAGCATGCAATAGCATTGATGAAGTT
ACATGGGGACTCAGATGTACCCGCCTATACCCCGAATATTTTATACTCCC
GCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXAAGAAGCTAAACTCCAGAAAAACAAACACCCTAACGAAA
AAATGATCTCTAGAGCTAAACAAAATTCTCAATTTAGGAATCTCAAAAGC
CTGAGAAGCACCTAAAGAAATGTTCAACATCCTTATTTATAGTGAAACAC
AAATCAAAACCACGCTGAGATTCCATCCTAAATCAATGAGAATGGTTGAG
ACCAAAATGTAAGGGGAAAATAGCTGCTAGAGCAAATGTCGATAAAAAGA
AAACTTTATCTTTGCTAGTGGGATTGAAAAGTGTTTTCCAGATTCCAAAA
TCTGGAAAATATTATGGCATTTCTTCACAAAATTGGAAATAAGTCTATCT
GAATATTCATATATACAACTTCTGGGCATATATCCCAAAAATCTCTACCA
TACCATAAGTAAACCTTCAGTATTTACAGCACCCTTAATTATAATAGCGG
GGGTTCAGGGACTATGCCGAACTTAGGAAATTAATCTGAACAGGTGAGAG
GGTGCAACACAGAACTGGAGAGCTTCTGGGACAGGCGGAGCCACAGAACC
GCTGAGGCAGCACCCTTTTCGGGCCGCAGACAGCCAGTCACCCTCCCAAC
CAGAGGACAGGTATCTGCCTGGTTCGGAAGGCCTCAGCCTCAGGAGCAGC
GGGTGCCACCTTGGTTCTGGGACGCCGCCGAACATAGGAATTTAGTCTGC
ACAGGCG

Query= MSMg01no346_b20.b1 MSMg01no346_b20.b1 CHROMAT_FILE:
MSMg01no346_b20.b1 PHD_FILE: MSMg01no346_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:43 2005
         (577 letters)



>mm_chrX_143707515_143708490
          Length = 976

 Score =  688 bits (356), Expect = 0.0
 Identities = 524/580 (90%), Gaps = 8/580 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccaggcattcttctctggtaaggttcagacctacagcttaagaaccacagatcttctaa 60
           ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 tccaggcattcttctttagtaaggttcagacctacagcttaagaaccacagatcttccaa 260

                                                                       
Query: 61  actactgtatgtaccaaggggacttctgatctgcccattctgaaccagggatcctcagat 120
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 261 actactgtatggaccaaggggacttctgatctgcccattctgaaccagggatcc-catat 319

                                                                       
Query: 121 catccccaatagcctaagtgaacttcaa-cttaactgtttagaaccaatgtgctggggtt 179
           | | ||||||||||||||||| ||| || |||| |||| ||||||||||||||||||  |
Sbjct: 320 cttacccaatagcctaagtgacctt-aatcttacctgtctagaaccaatgtgctgggact 378

                                                                       
Query: 180 ggagagatggctcagcagttataaa-cactgactgctctaccacaggtcctgagttcaat 238
           | ||| ||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||
Sbjct: 379 gaagatatggctcagcagtta-aaagcactgactgctcttccacaggtcctgagttaaat 437

                                                                       
Query: 239 tctcagtaaccacgtgttgtctcacaaccatctgtcatgggacccgatgccaccttatgg 298
           || ||| |||||| || || ||||||| ||||||| ||| ||||||||||||| ||||||
Sbjct: 438 tcccagcaaccacatggtggctcacaatcatctgtaatgagacccgatgccactttatgg 497

                                                                       
Query: 299 tgtgtctgaagacaat-atcagtatacccacacacatgaaaaataaccgatgtgactcac 357
           |||||||||||||||| | ||||||||||||| |||||||| | |||| ||||| |||||
Sbjct: 498 tgtgtctgaagacaatga-cagtatacccacatacatgaaatagaacctatgtgcctcac 556

                                                                       
Query: 358 aacttccaccaataactcaagggggtttcagatgtaacccctgaa-atcaaatatgttag 416
           ||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||
Sbjct: 557 aactttcaccaataactcaagggggtttcagatgtaccccctcaacatcaaatatgttag 616

                                                                       
Query: 417 aaactccccagtattgaaggcagcattaacatatgagaaccagaaacctcagaaattctt 476
           |||||||||||| ||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct: 617 aaactccccagtgttgaaggtatcattaacacatgagaaccagaaacctcagaaattctt 676

                                                                       
Query: 477 taattcccctcagaattacctcttaagaacaaaggtgtcacataggtcctcaataactga 536
           ||||| |||| ||||||||| ||| ||||||| |||||||||||||| |||||| |||||
Sbjct: 677 taattgccctgagaattaccacttcagaacaatggtgtcacataggttctcaatgactga 736

                                                   
Query: 537 agatgccctgatccatatgacatgataaacaaaggacttc 576
           |||||||||||| |||| |||||||||| ||||| |||||
Sbjct: 737 agatgccctgatacatacgacatgataatcaaagaacttc 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 976
Length adjustment: 10
Effective length of query: 567
Effective length of database: 966
Effective search space:   547722
Effective search space used:   547722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)