XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAC
CTGACGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCC
TTAATCATCAGGGAAATGCAAATCAAAACAACCCTAAGATTCCACCTCAC
ACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGC
GAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGG
CTTGTACAACCACTCTGGAAATCCATCTGGCGGTTCCTCAGAAAATTGGA
CATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAG
AAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCA
GCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAAC
AGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTACT
CAGCTATTACAAAGAATGAATTTATGAAATTCCTAGCCCAATGGATGGAC
CTGGAGGCTATCCATCTTGAGTGAGGTTACTCATTCTCTAAGGAACTCAC
CTTAATGTACTCATTGTAAACTGGATATTAGCCCAAAATTTATGAAACCC
CTTATTAACAATACCCCTCCTCTAATACCTGCGCCTTCTTTATTACGGAA
CATCGAAGTGTGGCTCTTAGCCTCTTCCTTAAAG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAAATTTTGGTGATTGTTGATATTTTAGCTCCAGT
AGTTACACTTTAATCAGAAGAAAAAAGGTTAAAAAATAAGGATGTAATTT
CTTTTTTTATGATCACATCCAGAAACATACTTTCTATTTATATTGATATC
CTGTTTACAAGGTTTAATAAACATGTCTATATCTAAGTGTAAAACCTATT
TTGTTTTGGGAAACTACATGACCAGTTAATAATGGAGCATTCTAGTACTA
AAAGAAGGAAGTAAGGAAAGACATTCAGAGATAACTAGTGTTTTCTTTCT
GGCAGTACAAATTTGTGATAAATTTACTACACTTGATCTTAGCCAAAAGC
CCGAGAAGCTATTTGTGATAAATTTACGTTGAGAATTAGAAAACTATACA
GGCCACAGATAACATTTGGCTTTACATCCGTTTTGTCTATAAACATTTAA
TCCACATACTCTTGTTTTGTGCTGTAGGAGAAAATTAGGCTACATTGGCA
TAGTGTAATATTTAGAGCAGAGGACACACATCCTGAAAAATATTTCTGTC
TTTTTACACACACACACACATATACACACACACACACACACCAAAATGTT
TTCTGACCCCAGTAATAAAGTTTCTCTGCTCCTGCAGATGCCTCTTAATC
TTTTGGGTTGGTAATGGATAAATCAACCATGATGGTCC

Query= MSMg01no346_l01.g1 MSMg01no346_l01.g1 CHROMAT_FILE:
MSMg01no346_l01.g1 PHD_FILE: MSMg01no346_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:27 2005
         (568 letters)



>mm_chrX_64824711_64825679
          Length = 969

 Score =  969 bits (501), Expect = 0.0
 Identities = 507/509 (99%), Gaps = 1/509 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaattttggtgattgttgatattttagctccagtagttacactttaatcagaag-aaaaa 59
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 509 aaattttggtgattgttgatattttagctccagtagttacactttaatcagaagaaaaaa 450

                                                                       
Query: 60  aggttaaaaaataaggatgtaatttctttttttatgatcacatccagaaacatactttct 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 aggttaaaaaataaggatgtaatttctttttttatgatcacatccagaaacatactttct 390

                                                                       
Query: 120 atttatattgatatcctgtttacaaggtttaataaacatgtctatatctaagtgtaaaac 179
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 389 atttatattgatatcctgtttacaaggtttaataaacatatctatatctaagtgtaaaac 330

                                                                       
Query: 180 ctattttgttttgggaaactacatgaccagttaataatggagcattctagtactaaaaga 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctattttgttttgggaaactacatgaccagttaataatggagcattctagtactaaaaga 270

                                                                       
Query: 240 aggaagtaaggaaagacattcagagataactagtgttttctttctggcagtacaaatttg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aggaagtaaggaaagacattcagagataactagtgttttctttctggcagtacaaatttg 210

                                                                       
Query: 300 tgataaatttactacacttgatcttagccaaaagcccgagaagctatttgtgataaattt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tgataaatttactacacttgatcttagccaaaagcccgagaagctatttgtgataaattt 150

                                                                       
Query: 360 acgttgagaattagaaaactatacaggccacagataacatttggctttacatccgttttg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 acgttgagaattagaaaactatacaggccacagataacatttggctttacatccgttttg 90

                                                                       
Query: 420 tctataaacatttaatccacatactcttgttttgtgctgtaggagaaaattaggctacat 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89  tctataaacatttaatccacatactcttgttttgtgctgtaggagaaaattaggctacat 30

                                        
Query: 480 tggcatagtgtaatatttagagcagagga 508
           |||||||||||||||||||||||||||||
Sbjct: 29  tggcatagtgtaatatttagagcagagga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 969
Length adjustment: 10
Effective length of query: 558
Effective length of database: 959
Effective search space:   535122
Effective search space used:   535122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)