This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-347J22
Chromosome
X (Build37)
Map Location
127,370,907 - 127,408,272
singlet/doublet
doublet
Overlap gene
none
Upstream gene
Diap2
,
LOC100040092
,
LOC665773
Downstream gene
LOC665799
,
LOC670449
,
LOC245600
Link
Open Mouse BAC browser
Click to get alignment info.
name
Diap2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:54004
MGI:1858500
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100040092
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040092
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
LOC665773
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665773
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665799
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
pseudo
: _no_value
name
LOC670449
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:670449
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
name
LOC245600
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:245600
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins
pseudo
: _no_value
name
Diap2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:118130794
GeneID:54004
MGI:1858500
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: diaphanous homolog 2 (Drosophila)
transcript_id
: NM_017398.2
name
LOC670449
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149272262
GeneID:670449
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
product
: similar to retinitis pigmentosa GTPase regulator
transcript_id
: XM_001475063.1
name
Diap2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:27777634
GeneID:54004
MGI:1858500
definition
GO_function
: GO:0003779 - actin binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0017048 - Rho GTPase binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO_process
: GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0030041 - actin filament polymerization [Evidence IDA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0016043 - cell organization and biogenesis [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0048477 - oogenesis [Evidence IEA]
codon_start
: 1
product
: diaphanous homolog 2
protein_id
: NP_059094.1
name
LOC670449
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149272263
GeneID:670449
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001475113.1
name
LOC100040092
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100040092
definition
number
: 1
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 3
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 2
pseudo
: _no_value
name
LOC665799
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665799
definition
number
: 1
pseudo
: _no_value
name
LOC665773
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149272259
GeneID:665773
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins
product
: similar to prohibitin
pseudo
: _no_value
transcript_id
: XR_032015.1
name
LOC245600
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149272264
GeneID:245600
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins
product
: similar to transforming acidic coiled-coil containing protein 1 long
pseudo
: _no_value
transcript_id
: XR_032090.1
clone name
MSMg01-234J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-414I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316B03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-486M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-541G12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-335N15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-156G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-267I17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-051N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263E06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331P21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458F16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-298M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341O12
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-410P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-534G18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376B04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-313K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-069M05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316H23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-231O22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-088J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-438I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308D20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-347J22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-138A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-434E23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502F05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-154E05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190G07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-186B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-531L13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289M17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-301B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-336H15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-081P19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-082E12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-445F10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-445F14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-236A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-148C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-534L18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426H19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392H24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181L22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235K12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-396K17
singlet/doublet
singlet
plural/unique
plural
clone name
B6Ng01-052I10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-138P09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-164C06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-127A17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-253O10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-253N11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-122A14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-085H09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-301M07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-307P04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120M10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-230A11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-210A05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-048P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173K02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-291G19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061M11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-181I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-233B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-228O09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-017O11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-155G08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111G23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-078D24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-087O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-088G18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-121P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-333A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-117D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-060B16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-095C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-332K15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-334D13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302F03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-290D06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-101K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-037D23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-067F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-061H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061I01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-333N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198J05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-334L19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-281N22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-099O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-130G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-061M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054M01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-278O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-024O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005I19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-302I22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119O20
singlet/doublet
singlet
plural/unique
unique