ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTTGATCCACTTAGATTTGACCTTAGTGCAAGGAGATAGGAATGGATT
AATTTGCATTCTTCTACATGCTAACCACCAGTTGTGCCAGCACCATTTGT
TGAAAATGCTGGGTTTTTTCCACTGGATGATTTTAGATTCCTTGTCAAAG
ATCAAGTGACTATTTGTGTGTGTAGGTTCATATCTGGGTCTTCAATTTTG
TTCCATTGGTCTACTTGTCTGTCGCTATACCAGTAACATGCAGTTTTTAT
CACAATTGCTCTGTAGTACAGCTTTATGTCAGGCGTGGTGATTCCACCAG
AGCTTCTTTTATACTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTA
TTCCAGATGAATTTAAAGATTGCTCTTTCGAATTTGTTGAAGAATTGAGT
TGGAATTTTAATGGAGATTGCATTGAATCTGTAGATTGCTTTTGGCAAGA
TAGCCATTTTTACTATATTGATCCTGCCAATCCATGAGCATGGGAGATCT
TTCCATCTTCTAAGATCTTCTTTAATTTCTTTCTTCAGAGACTTGATATT
TTTATCATATAGATCTGTCCCCTCCTTAGAGTCACGCCAAGGTATTTTAT
ATTATTTGTGACTATTGAGAAAGGTGTTGTTTCCCTAATTTCTTTTTCAG
CCTGTTTATCATTTGTGTAGAGAAAG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATGCTGGCTCTTTTCCAAGA
CATTTGCTATTAACACCAAATAGAAACCAAAAGCTAAACTTTTTTTTTTT
TAAAGAGAGGTATTTGCTTCCTCATATTAAGCAAAAAGACCCTAGAGTCT
GGGTAGCTATTGATGGCTTTTTTTTTTCCAGTTGGAAGGGCAGGGCCACA
AAGCATGGCTACAGAACGCCTTGGCTTTTCTAAGGCAACACTGCCATCAT
GCGGAGATAGTTTCATAAATTCCTTGTGCCTAGTTTGTGTCTTGTTCTGC
CATGTTTGGTTGATAGTCCTAGGAGGTCTGCTCTTTTCTGAAGGGAAACA
GAGAAGTGGATCTTCGGGGTAGGAGCTGAGGAGCATCCTCTATGTCTTCT
CTTCTTGGGGCTGTTTGCTCTGGATCTATGTTACTAAAAAACGGCTTCCT
CCGAGGGTTGCTACTTTCAATTCTCGCAAACGTACTAAATTTCGTTTGCA
GCAGCCCAGTGAATTGGACACAGAAGACATGAGCAGACCAAAGTGCTTAA
CATGGTGGTAATCAATCCAAAGCCCTCTCTAATTCTTGTTCCATGAGACT
GGAACGGTGAAACAGAGCCCCAGAGCGTCCGTGCTAGTGTTTAATTGGAT
TCTTCGAGACTTGTTCCCAGTAGGAAGTCCGGAGGTCCCN

Query= MSMg01no349_g10.g1 MSMg01no349_g10.g1 CHROMAT_FILE:
MSMg01no349_g10.g1 PHD_FILE: MSMg01no349_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:00 2005
         (557 letters)



>mm_chrX_47902719_47903675
          Length = 957

 Score = 1054 bits (545), Expect = 0.0
 Identities = 556/561 (99%), Gaps = 4/561 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgctggctcttttccaagacatttgctattaacaccaaatagaaaccaaaagctaaac 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 catgctgactcttttccaagacatttgctattaacaccaaatagaaaccaaaagctaaac 256

                                                                       
Query: 61  tttttttttttt--aaagagaggtatttgcttcctcatattaagcaaaaagaccctagag 118
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttttttttttttttaaagagaggtatttgcttcctcatattaagcaaaaagaccctagag 316

                                                                       
Query: 119 tctgggtagctattgatggctttttttttt--ccagttggaagggcagggccacaaagca 176
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 317 tctgggtagctattgatggcttttttttttttccagttggaagggcagggccacaaagca 376

                                                                       
Query: 177 tggctacagaacgccttggcttttctaaggcaacactgccatcatgcggagatagtttca 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggctacagaacgccttggcttttctaaggcaacactgccatcatgcggagatagtttca 436

                                                                       
Query: 237 taaattccttgtgcctagtttgtgtcttgttctgccatgtttggttgatagtcctaggag 296
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 taaattccttgtgcctagtttgtgtcttgttctgccatgtttggttgatagtcctaggag 496

                                                                       
Query: 297 gtctgctcttttctgaagggaaacagagaagtggatcttcggggtaggagctgaggagca 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gtctgctcttttctgaagggaaacagagaagtggatcttcggggtaggagctgaggagca 556

                                                                       
Query: 357 tcctctatgtcttctcttcttggggctgtttgctctggatctatgttactaaaaaacggc 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tcctctatgtcttctcttcttggggctgtttgctctggatctatgttactaaaaaacggc 616

                                                                       
Query: 417 ttcctccgagggttgctactttcaattctcgcaaacgtactaaatttcgtttgcagcagc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttcctccgagggttgctactttcaattctcgcaaacgtactaaatttcgtttgcagcagc 676

                                                                       
Query: 477 ccagtgaattggacacagaagacatgagcagaccaaagtgcttaacatggtggtaatcaa 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ccagtgaattggacacagaagacatgagcagaccaaagtgcttaacatggtggtaatcaa 736

                                
Query: 537 tccaaagccctctctaattct 557
           |||||||||||||||||||||
Sbjct: 737 tccaaagccctctctaattct 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 957
Length adjustment: 10
Effective length of query: 547
Effective length of database: 947
Effective search space:   518009
Effective search space used:   518009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)