Query= MSMg01no350_g11.b1 MSMg01no350_g11.b1 CHROMAT_FILE:
MSMg01no350_g11.b1 PHD_FILE: MSMg01no350_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:19 2005
(502 letters)
>mm_chrX_55403277_55404178
Length = 902
Score = 845 bits (437), Expect = 0.0
Identities = 455/461 (98%)
Strand = Plus / Minus
Query: 42 cataggggtaagaatttctgctgaggacagcgcatcccacatctagcaaccttgatcacc 101
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 902 cataggggtaagaatttctgctgaggacagcgcatcccacatctagcaaccgtgatcgcc 843
Query: 102 tagaaaaggatcctgccagcagtgcagagagacttgtctatgtctctctagaagtcgctt 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tagaaaaggatcctgccagcagtgcagagagacttgtctatgtctctctagaagtcgctt 783
Query: 162 tcttccaagcgaaagcacatccctgtgatcccagcacttacaaggtcagactgagctaca 221
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 782 tcttccaagcgaaagcacatccctgtgatcccagcacttacaaggtcacactgagctaca 723
Query: 222 caacaagaccctgtctcgaacctttccttattttccagcatactcctctttgagacttat 281
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 722 caacaagaccctgtctcgaacctttccttattttccagcatactcctctttgggacttat 663
Query: 282 gcccacctcccttgtccacctcttcttctctgtatgttcttcagcggtgaccttgccact 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gcccacctcccttgtccacctcttcttctctgtatgttcttcagcggtgaccttgccact 603
Query: 342 tagctctctgagaagaacccaactcatcagataaacatgattcatcttccttttaccagg 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tagctctctgagaagaacccaactcatcagataaacatgattcatcttccttttaccagg 543
Query: 402 acaaactcaactacccttgcctccattgtaggcctctccctgaacctcagggcatacttc 461
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 542 acaaactcaactacctttgcctccattgtaggcctctgcctgaacctcagggcatacttc 483
Query: 462 ctctagtctacaaccaaccctgccttgcgtgtggagggtgg 502
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctctagtctacaaccaaccctgccttgcgtgtggagggtgg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_g11.g1 MSMg01no350_g11.g1 CHROMAT_FILE:
MSMg01no350_g11.g1 PHD_FILE: MSMg01no350_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:19 2005
(450 letters)
>mm_chrX_55234031_55234880
Length = 850
Score = 859 bits (444), Expect = 0.0
Identities = 448/450 (99%), Gaps = 2/450 (0%)
Strand = Plus / Plus
Query: 1 taggccaccttgggtcacagtgagttctaggacaatgtctggtacaatgtaagatcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 taggccaccttgggtcacagtgagttctaggacaatgtctggtacaatgtaagatcctat 262
Query: 61 gttgaaaagacaaaaagaaaaaaaaaaggaaaggaaaaatattctagctaacttgatact 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gttgaaaagacaaaaag--aaaaaaaaggaaaggaaaaatattctagctaacttgatact 320
Query: 121 tctatgtcttctggtgtgctggtagctcatgtacaccatcttagatttcctttaagactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctatgtcttctggtgtgctggtagctcatgtacaccatcttagatttcctttaagactt 380
Query: 181 aattcaagttaaaatcctatctagattgaaggtctaatcaaatatcacctttcccattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattcaagttaaaatcctatctagattgaaggtctaatcaaatatcacctttcccattaa 440
Query: 241 tttttctttggtctcagcagataggaattttctttcttctgaacattgtttaaatctctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttttctttggtctcagcagataggaattttctttcttctgaacattgtttaaatctctt 500
Query: 301 tatttatgtgcttatttacttgctaatttactcattcattcaaccatttggtgttttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatttatgtgcttatttacttgctaatttactcattcattcaaccatttggtgttttgag 560
Query: 361 accaggtttctctgcaacccctggctgtcctggaatttactctgtagatcagactagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 accaggtttctctgcaacccctggctgtcctggaatttactctgtagatcagactagcct 620
Query: 421 agaatggagaggttcacctgcctctgcctc 450
||||||||||||||||||||||||||||||
Sbjct: 621 agaatggagaggttcacctgcctctgcctc 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
