Query= MSMg01no351_p02.b1 MSMg01no351_p02.b1 CHROMAT_FILE:
MSMg01no351_p02.b1 PHD_FILE: MSMg01no351_p02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:18 2005
(630 letters)
>mm_chrX_63538158_63539187
Length = 1030
Score = 1164 bits (602), Expect = 0.0
Identities = 620/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Plus
Query: 5 gaattcaattatatatggcatgtaagtagagtctagtgaatcttaaagtttcttacataa 64
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 205 gaattcaattatatatggcatgtaagcagagtctagtgaattttaaagtttcttacataa 264
Query: 65 gaatctcattgaattttatcacccctttctgtacaggtaaatataagagaggagtaattt 124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 gaatctcattgaattttatcacccctttctgtacaggtaaatataag-gaggagtaattt 323
Query: 125 gggtaaagaatatctagagctcagctttgaatatcttaaattggggctgctatttgtcat 184
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 gggtaaagaatatctagagctcagctttgaatatcttaaagtggggctgctatttgtcat 383
Query: 185 ctaaatagttacaagtagaaaattactacaatagcagttatggagcccagaggatacaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctaaatagttacaagtagaaaattactacaatagcagttatggagcccagaggatacaac 443
Query: 245 tgaacaggagaaattgaataacatcagcatctcgatgatatttatagcctgaatcaaata 304
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaacaggagaaattgaatatcatcagcatctcgatgatatttatagcctgaatcaaata 503
Query: 305 aaggtaccaaaggcaatgagtagaggatccaagattattccttgaaagaagcaatggtaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aaggtaccaaaggcaatgagtagaggatccaagattattccttgaaagaagcaatggtaa 563
Query: 365 gaagtctgtgaaatgtgaggaaagcaaaagaaaccaagaaagatatctgagatgctgaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaagtctgtgaaatgtgaggaaagcaaaagaaaccaagaaagatatctgagatgctgaag 623
Query: 425 tttaatctgcaaaatacattggcctaaaaagatagttggaaaactatctttagagtattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tttaatctgcaaaatacattggcctaaaaagatagttggaaaactatctttagagtattt 683
Query: 485 ttgcattgatgatcataagggaaactggtctgaagttctctttctttgttgggtctttgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 684 ttgcattgatgatcataagggaaactggtctgaagttctctttctttgttgggtcattgt 743
Query: 545 atggtttagatataagcataattgtggcaccatagaatgcattaggtagtgttccttctg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atggtttagatataagcataattgtggcaccatagaatgcattaggtagtgttccttctg 803
Query: 605 tttctattttgtgtaatagttccaag 630
||||||||||||||||||||||||||
Sbjct: 804 tttctattttgtgtaatagttccaag 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space: 632400
Effective search space used: 632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_p02.g1 MSMg01no351_p02.g1 CHROMAT_FILE:
MSMg01no351_p02.g1 PHD_FILE: MSMg01no351_p02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:18 2005
(561 letters)
>mm_chrX_63555752_63556712
Length = 961
Score = 1046 bits (541), Expect = 0.0
Identities = 556/561 (99%)
Strand = Plus / Minus
Query: 1 tgtgatggtgggaaggacaaaagagaaaatgcaggtgtgtgagaagggaagctgttaaat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 761 tgtgatggtgggaaggacaaaagagaaaatgcaggtgcgtgagaagggaagctgttaaat 702
Query: 61 gggtagtttctgagacagatcttgagacaaacaataataaaactagataccaatttctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gggtagtttctgagacagatcttgagacaaacaataataaaactagataccaatttctga 642
Query: 121 aagtacatttcattttataagtctatatctgaaaccaagagaaaagaaaagaaggtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 aagtacatttcattttataagtctatatctgaaaccaagagaaaagaaaagaaggtggtg 582
Query: 181 caactgacatatgcaaatgggttggacatgacatcagatctactttatagatggaagact 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caactgacatatgcaagtgggttggacatgacatcagatctactttatagatggaagact 522
Query: 241 attgctgtgtgcctagacaaggcaagggttaatactgaagtttgtgcatgacatgtctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 attgctgtgtgcctagacaaggcaagggttaatactgaagtttgtgcatgacatgtctta 462
Query: 301 tttaaggaagacatctcctttttaatgagaatgcaaaatggtttcattatttcatcatta 360
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 461 tttaaggaagacatctcctttttaatgagtatgcaaaatggcttcattatttcatcatta 402
Query: 361 cacatgtatcatatacattgcttatattttccttccattaccttctctgttcatttatct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 cacatgtatcatatacattgcttatattttccttccattaccttctctgttcatttatct 342
Query: 421 cccgttagtctttctactttattctaataaagtccttgttatggcttgaatctatgatat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cccgttagtctttctactttattctaataaagtccttgttatggcttgaatctatgatat 282
Query: 481 tccccatagactaatgcctctaactcattcatgccattcctatcaatatgagtagtaata 540
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 ttcccatagactaatgcctctaactcattcatgccattcctatcaatatgagtagtaata 222
Query: 541 atgaaaactttccttcccata 561
|||||||||||||||||||||
Sbjct: 221 atgaaaactttccttcccata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
