Query= MSMg01no354_l03.b1 MSMg01no354_l03.b1 CHROMAT_FILE:
MSMg01no354_l03.b1 PHD_FILE: MSMg01no354_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:55 2005
(559 letters)
>mm_chrX_89745187_89746145
Length = 959
Score = 1042 bits (539), Expect = 0.0
Identities = 551/555 (99%)
Strand = Plus / Minus
Query: 5 gaattcaaggccagcctggtctacagagtgagtttcaggacatctacagctacacagaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 gaattcaaggccagcctggtctacagagtgagtttcaggacatctacagctacacagaga 767
Query: 65 aaccccatattgaatccccctccaaaaaaaaaaaaagattcaagattctgtagcttggca 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 766 aaccccatattgaatccccctccaaaaaataaaaaagattcaagattctgtagcttggca 707
Query: 125 attcgggcaaggattagttgtttttttgttttcttttgttttctttttgttttgttctgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 attcgggcaaggattagttgtttttttgttttcttttgttttctttttgttttgttctgt 647
Query: 185 tttttgaggtatatgtgtgcttcttagctttgtttacttcattacatctttattaagatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 tttttgaggtatatgtgtgcttcttagctttgtttacttcattacatctttattaagatg 587
Query: 245 ctggttagcaaattggccctgtgtttagggcttacaggttgtcagctacaatgatagaag 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ctggttagcaaattgtccctgtgtttagggcttacaggttgtcagctacaatgatagaag 527
Query: 305 ataagtgggctttagtcaactattctgggctattttatgtgatagaagtttctaaaagaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ataagtgggctttagtcaactattctgggctattttatgtgatagaagtttctaaaagaa 467
Query: 365 gggagtcttaagtcctgagtgttttaaaatctcacaagcaccaaaacaagttttgagtgg 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gggagtcttaaatcctgagtgttttaaaatctcacaagcaccaaaacaagttttgagtgg 407
Query: 425 ataaaggagaagacttcccagagataaggattgggagggattggagagggatatagaaac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ataaaggagaagacttcccagagataaggattgggagggattggagagggatatagaaac 347
Query: 485 ctagtccagttggaaacttcctggaatctgtgaaggtgaccctagggaggactcctagta 544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctagtgcagttggaaacttcctggaatctgtgaaggtgaccctagggaggactcctagta 287
Query: 545 atgaaggatactgag 559
|||||||||||||||
Sbjct: 286 atgaaggatactgag 272
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_l03.g1 MSMg01no354_l03.g1 CHROMAT_FILE:
MSMg01no354_l03.g1 PHD_FILE: MSMg01no354_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:55 2005
(546 letters)
>mm_chrX_89595182_89596128
Length = 947
Score = 1042 bits (539), Expect = 0.0
Identities = 545/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Plus
Query: 1 caacttaattcgaaggtggtaatcagactgcattgttgtggttgaatatttaatatgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caacttaattcgaaggtggtaatcagactgcattgttgtggttgaatatttaatatgcac 260
Query: 61 ttcaatttcataaaaattaaatatgtgtgatctagactatttttattccaaggcttacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaatttcataaaaattaaatatgtgtgatctagactatttttattccaaggcttacta 320
Query: 121 tggaaaatgatacatgttttttttt-aatcctctgaagtatttaagtatatctctcttca 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaaaatgatacatgttttttttttaatcctctgaagtatttaagtatatctctcttca 380
Query: 180 tcttaattctaaaatgaccatccattttctaagtacttgttttcctaaatgacaaaaaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttaattctaaaatgaccatccattttctaagtacttgttttcctaaatgacaaaaaaa 440
Query: 240 tattcaattagtggtaagaaatatcctctttgtcataaaaatcaagctaccaatctgtta 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattcaatcagtggtaagaaatatcctctttgtcataaaaatcaagctaccaatctgtta 500
Query: 300 aagtaatgcatcatcataatgataaacaaattactatccttgataaattcaataaacacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagtaatgcatcatcataatgataaacaaattactatccttgataaattcaataaacacc 560
Query: 360 acttaaaaggaaaactgaagccaaacagaaaatactaatagagataaatcaggtagttag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acttaaaaggaaaactgaagccaaacagaaaatactaatagagataaatcaggtagttag 620
Query: 420 caacatccttcaaaaccgagtatgtgtactttaatagacatcaaattctcctctgctttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caacatccttcaaaaccgagtatgtgtactttaatagacatcaaattctcctctgctttt 680
Query: 480 aaaaaagatacattaggtactactcagttctccatgggtaaacctttaagaagttatata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaaaaagatacattaggtactactcagttctccatgggtaaacctttaagaagttatata 740
Query: 540 aagaatg 546
|||||||
Sbjct: 741 aagaatg 747
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 546
Length of database: 947
Length adjustment: 10
Effective length of query: 536
Effective length of database: 937
Effective search space: 502232
Effective search space used: 502232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
