Query= MSMg01no355_e05.b1 MSMg01no355_e05.b1 CHROMAT_FILE:
MSMg01no355_e05.b1 PHD_FILE: MSMg01no355_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:40 2005
(616 letters)
>mm_chrX_138252129_138253144
Length = 1016
Score = 1035 bits (535), Expect = 0.0
Identities = 558/567 (98%), Gaps = 3/567 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtggctttaggaatcttttcccagcatttacaaattgcagcttggctagtagt 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaattcagtggcattaggaatcttttcccagcatttacaaattgcagcttggctagtagt 505
Query: 65 aactttggacagccagaaatgtccattttaatgtgcaatcttacagatatatcataatgt 124
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 504 aactttggacagccagaaatgtccattttaacgtgcaatcttacagatatatcataatgt 445
Query: 125 gactttagtattgctccttggctaggttgttatccaatttctgatttgtgatgctggaag 184
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 gactttagtattgctcctcggctaggttgctatccaatttctgatttgtgatgctggaag 385
Query: 185 cattccagcagaatctaatggcagaatagatctgggtgtttgtgagcaccagttatagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cattccagcagaatctaatggcagaatagatctgggtgtttgtgagcaccagttatagat 325
Query: 245 ggaatatgaagtcttctcataaggaggttgtactaccaaatgaaccactccacatgcttg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggaatatgaagtcttctcataaggaggttgtactaccaaatgaaccactccacatgcttg 265
Query: 305 gctcacactgatcaaggttctcttgtgacttgcacatttagaaatgcctctctacccagg 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 gctcacactgatcaaggttctcttgtgacttgcacatttagaaatgtctctctacccagg 205
Query: 365 ctcagtccatttgtcatctgtatgtaggaaggttactgatttttgtgtgttacatgttta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctcagtccatttgtcatctgtatgtaggaaggttactgatttttgtgtgttacatgttta 145
Query: 425 ttagctgtagaaagtttcctagtggaaatcacattttaaaatccttttacttgcccatct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttagctgtagaaagtttcctagtggaaatcacattttaaaatccttttacttgcccatct 85
Query: 485 ttcttctttgtcatttaccttttaaggataataatattttaaaatatgtttttgaagaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 84 ttcttctttgtcatttaccttttaaggataataatattttaaaatatgttttt---gaaa 28
Query: 545 tagttgttatatcatttccccttcctt 571
|||| ||||||||||||||||||||||
Sbjct: 27 tagtagttatatcatttccccttcctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_e05.g1 MSMg01no355_e05.g1 CHROMAT_FILE:
MSMg01no355_e05.g1 PHD_FILE: MSMg01no355_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:40 2005
(516 letters)
>mm_chrX_138092144_138093060
Length = 917
Score = 946 bits (489), Expect = 0.0
Identities = 510/517 (98%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 1 ggacatcattttcaaagtcagctgtaatgtgatctgacttgattgtttctggagagtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 201 ggacatcattttcaaagtcagctgtaatgtgatctgacttgattgtttctgaagagagtt 260
Query: 61 gctttttcctttgtttaccactgaagaaagacagaggaaatattctcagccacattaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctttttcctttgtttaccactgaagaaagacagaggaaatattctcagccacattaact 320
Query: 121 gtctcgcatgcaatataaagaactgaagccagtgtcttgctttgtttgcctgtcataatt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcttgcatgcaatataaagaactgaagccagtgtcttgctttgtttgcctgtcataatt 380
Query: 181 caaataaaccaaactattatccccttatattctaattagcgctgcacttatttgtaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaataaaccaaactattatccccttatattctaattagcgctgcacttatttgtaacta 440
Query: 241 ggagtggagctctcagttgaacatttctgtaataataataatagaaaagcagtagccaca 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 ggagtggagctctcagttgaacatttctgtaataatagtaatagaaaagcagtagccaca 500
Query: 301 aacatgattttgcaatcactgtttctaaagactaatcaaccttctccaaagaagaatgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatgattttgcaatcactgtttctaaagactaatcaaccttctccaaagaagaatgca 560
Query: 361 catctaatgaatgtttgatttcttgatttgtttataaactacagatctaaaataaagtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catctaatgaatgtttgatttcttgatttgtttataaactacagatctaaaataaagtgt 620
Query: 421 taaatcaatttctcttagaattgaatgttccaaatttgagctcataacaatgaacatcat 480
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaatcaatttctcttagaattaaatgttccaaatttgagctcataacaatgaacatcat 680
Query: 481 aatatgatttttt-gaaatttcaaactttattacgtg 516
||||||||||||| ||| |||||||||||||||||||
Sbjct: 681 aatatgatttttttgaactttcaaactttattacgtg 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 917
Length adjustment: 10
Effective length of query: 506
Effective length of database: 907
Effective search space: 458942
Effective search space used: 458942
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
