Query= MSMg01no355_e14.b1 MSMg01no355_e14.b1 CHROMAT_FILE:
MSMg01no355_e14.b1 PHD_FILE: MSMg01no355_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:41 2005
(590 letters)
>mm_chrX_92903738_92904727
Length = 990
Score = 1094 bits (566), Expect = 0.0
Identities = 581/586 (99%)
Strand = Plus / Plus
Query: 5 gaattcctgcgtgtctcattgttttttaaagctaaagaattaaatttggtagtgagtttg 64
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgcgagtttcattgttttttaaagctaaagaattaaatttggtagtgagtttg 264
Query: 65 aaaggaagataataaagtcacacatttacagtgaagaatggttaaggtttagaatgacag 124
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaggaagctaataaagtcacacatttacagtgaagaatggttaaggtttagaatgacag 324
Query: 125 ctaaggacattttcttgggcagagacttccgtgacactggaaaaggaaactaaatatttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctaaggacattttcttgggcagagacttccgtgacactggaaaaggaaactaaatatttg 384
Query: 185 gggacataaatttgggtccagaggtcagagtgagtttcctcagaagagctggaataaaaa 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggacataaatttgggtccaaaggtcagagtgagtttcctcagaagagctggaataaaaa 444
Query: 245 caatcaacagatgtgatgaactattacaaacacagggctcaaatggttgggattccagga 304
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 caatcaacagatgtgatgaactattacaaacacagggctcaaatggttggaattccagga 504
Query: 305 actaccccagttttggagacccttcacctcacctatcaaaatgaaatcatgtacacaatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actaccccagttttggagacccttcacctcacctatcaaaatgaaatcatgtacacaatg 564
Query: 365 agattgaccctgaatatctggtaagatttgcctttgatatcttatcattctggtcttctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agattgaccctgaatatctggtaagatttgcctttgatatcttatcattctggtcttctt 624
Query: 425 gaaaagctctgttgaggaactctaacaagaatcctcatagtcttggtgtttgatcttagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaaaagctctgttgaggaactctaacaagaatcctcatagtcttggtgtttgatcttagt 684
Query: 485 cattttccagtcactcacctctgtcttgcttcttggtcatatagcctcagttgctcacgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cattttccagtcactcacctctgtcttgcttcttggtcatatagcctcagttgctcacgt 744
Query: 545 cagaattgagcccatatctctgccctactgcaatcctctactgcag 590
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagaattgagcccatatctctgccctactgcaatcctctactgcag 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_e14.g1 MSMg01no355_e14.g1 CHROMAT_FILE:
MSMg01no355_e14.g1 PHD_FILE: MSMg01no355_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:42 2005
(456 letters)
>mm_chrX_93084312_93085167
Length = 856
Score = 822 bits (425), Expect = 0.0
Identities = 437/441 (99%), Gaps = 2/441 (0%)
Strand = Plus / Minus
Query: 17 gaaacatgtagaaggaaaaaggaaaaactgtcataattaacagcagccttcttttcttgc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 gaaacatgtagaaggaaaaaggaaaaactgtcataattaacagcagccttcttttcttgc 797
Query: 77 attctttctccttcccctcctcctagtttccttccttcgtatttttatttccttatttct 136
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 796 attctttctccttcccctcctcctagtttccttccttcatatttttatttccttatttct 737
Query: 137 tcacttatcatgttctggggaccaaacccgaggtctcaagcatgctagaaaagtatgcta 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tcacttatcatgttctggggaccaaacccgaggtctcaagcatgctagaaaagtatgcta 677
Query: 197 tcactgcaatatgccctagctgaaacatgttttccatactactgaaaatggttg-ttttt 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 676 tcactgcaatatgccctagctgaaacatgttttccatactactgaaaatggttgtttttt 617
Query: 256 ttttttctaatgctgtttttttttctttcaaatatatacattaaggccaatgatatattt 315
||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 ttttttctaatgctg-ttttttttctttcaaatatatacattaaggccaatgacatattt 558
Query: 316 tctggatataccatgtgaaaaacttttttgaaaacatgaaaatggtataaaaactctatt 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctggatataccatgtgaaaaacttttttgaaaacatgaaaatggtataaaaactctatt 498
Query: 376 cataagaaaatgatgaaatcatatagtcatgattttatctcggatatttagttcccttta 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cataagaaaatgatgaaatcatatagtcatgattttatctcggatatttagttcccttta 438
Query: 436 atcactgtgatagaagctgga 456
|||||||||||||||||||||
Sbjct: 437 atcactgtgatagaagctgga 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
