XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CTAAAACTCTGAGAATTTGGGGCACCTGTGAGGAATTTTTTTTCCTGATT
TGATTATGTGAGATAGGAAGACCAACCCCAAATGTAGATCGTTTGTTCTG
TTGTAGAAACAACTCTAAAATATAAATTTCATTGATGTTAGTTTTTTAAT
AAAAGTGTGTAGCTAGGACTAAATTCTAGTAGTTACAATCAAGATAGTTT
TTATAATCCTACACTGTTTCTGTCTTTTATTACACTGTTTCCTGAACACT
GAGGTGGAGATTTGATGGTGACCTCCCTTGTAGGACTGAATGTTAGAAGG
TCCCTCAGACTTTGCATATTATCTGGCTGCAAGTCTCTGTATTTGTTTCC
ATCTGCTGCATGAGGATACTTCTGTGATGATGAATGAGCAATATACAGAC
CTGTGAGTATAGCAAAATGTCAACAGGAGTCATTTAACTGCTATACTCCT
TTAGTAGAATAGTAGTATTTGGTCTTTCTCTAGATCCCTGGCATTTCTAG
TTTCAGGTTCTTGGNCATTCAAGCATTGTTGAGTATGGATTCACCTAATG
ATATCTGTGATGTATATGCTTGGCACAGGGAATGGCATTATTAGAGAAGG
GGTCTTTGGAAAAATGGGCCACTAAAGGGTGGGCCTAATACCTTTCTCTT
ACTTGGGAAAAATCTATTTCTCTTTTAGCCTTTCCATCAGAAATTAAATC
CCTCTTTTGCTC

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGACATAATTCAGACCAGGCTGTCTTTA
TTTATTTGTTGTTTTACTTTAGGAAAGTAAGCTCTAGCTCTATATCTCAG
GATTGTCTGAAACCTCAATTGCAGCCTGGACTGGCCTTGTACCTGAAGTC
CTCAGCCTCAGAAATGTAATGGGGCCCGAGGAATCATGCCTTCTTTATTT
TTTATATCTAAATTTTGGGGGTTTTTATTTTTCATTCCTGAAGATTGAAA
CCAGAGCTTCTTGCTGTAGCAGTAACATATTTGTCCAGCCAGGAAGAATT
TTATATTTAAGATTTGTCTTAGATTTGTATTGTGATGAAAAAGGTTGAGG
AGCTTGGTTGTGATAAGAGCAACTATGATTTTATTTGGAGATTGAGATGC
AGACACATTTACTCTAATTTATCAAAAAACTAGCAGGAATGGGAAAAATT
TAGATCATCCTGTGATTAGATGTAACCCACTTGAAGCCACAGTTTAAGCC
TCCCAATGCGTGTGTGTGTGTTGTTGTCCTTCTACTCTTATTATTTTTTA
CTTTTTTATTCCTCCTATCTTTTCCCTTTTATTTTTTTCTTCTTTTTTCA
TTGTGTTCTTACTCTGTTTTCCATTCCATTTCCATTTTTCTTTTTTTTTC
TCTCTTTCCCACTTTTTCTCTTTTTTATCTCTTATTCCTTAATTTCCTTT
TACTATATCTCACT

Query= MSMg01no357_b18.b1 MSMg01no357_b18.b1 CHROMAT_FILE:
MSMg01no357_b18.b1 PHD_FILE: MSMg01no357_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:01 2005
         (495 letters)



>mm_chrX_122666915_122667809
          Length = 895

 Score =  739 bits (382), Expect = 0.0
 Identities = 466/496 (93%), Gaps = 4/496 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcactaaaactctgagaatttggggcacctgtgaggaatttttttt----cctga 59
           ||||||||||| ||||||||||| |||||||||||||||||||||||||||    |||||
Sbjct: 200 ggaattcactagaactctgagaaattggggcacctgtgaggaattttttttttttcctga 259

                                                                       
Query: 60  tttgattatgtgagataggaagaccaaccccaaatgtagatcgtttgttctgttgtagaa 119
           |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||
Sbjct: 260 tttgattatgtgagataggaagtccaaccccaaatgtagatcgtttgttttgttatagaa 319

                                                                       
Query: 120 acaactctaaaatataaatttcattgatgttagttttttaataaaagtgtgtagctagga 179
           ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 320 acaactctacaatataaatttcattgatgctagttttttaataaaagtgtgtagctagga 379

                                                                       
Query: 180 ctaaattctagtagttacaatcaagatagtttttataatcctacactgtttctgtctttt 239
           |||||||||||||||| |||||||||| |||||||| ||| || ||||||||||||||||
Sbjct: 380 ctaaattctagtagtttcaatcaagatcgtttttatgatcttatactgtttctgtctttt 439

                                                                       
Query: 240 attacactgtttcctgaacactgaggtggagatttgatggtgacctcccttgtaggactg 299
           |||||| |||| ||||| |||||||| ||||||||||||||||||||| |||| ||||||
Sbjct: 440 attacagtgttccctgagcactgagggggagatttgatggtgacctcctttgtgggactg 499

                                                                       
Query: 300 aatgttagaaggtccctcagactttgcatattatctggctgcaagtctctgtatttgttt 359
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 aatgttagaaggtccctcaggctttgcatattatctggctgcaattctctgtatttgttt 559

                                                                       
Query: 360 ccatctgctgcatgaggatacttctgtgatgatgaatgagcaatatacagacctgtgagt 419
           ||||||||||||||||||||| ||||||||||||||||||||| ||||||| || |||||
Sbjct: 560 ccatctgctgcatgaggatacctctgtgatgatgaatgagcaagatacagatctatgagt 619

                                                                       
Query: 420 atagcaaaatgtcaacaggagtcatttaactgctatactcctttagtagaatagtagtat 479
           ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 620 atagcaaaatgtcaacaggagtcatttatttgctatactcctttagtagaatagtagtat 679

                           
Query: 480 ttggtctttctctaga 495
           ||||||||||||||||
Sbjct: 680 ttggtctttctctaga 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)