TTATTATTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAAAACACTCCAGGCATTCTTCTCTGGTAAGGTTCAGAC
CTACAGCTTAAGAACCACAGATCTTCTAAACTACTGTATGGACCAAGGGA
ACTTCTGATATGCCCATTCTGAACCAGGGATTCTCAGATCATCACCAATA
GCCTAAGTGACCTTCATCTTACCTGTCTAGAACCAATGTGCTGGGGCTGG
AGAGATGGCTCAGCAGTTAAAAGCACTGACTTCTCTTCCAAAGGTCCTGA
GTTCAATTCTCAGCAATCACTTCTTGTACTACAACCATCTGTCATGTGAC
CTGATGCCACCTTATGGTGTGTCTGAAGACAATGACAGTATACCCACATA
CATGAAATAGAACCTATGTGACTCACAACTTACACCAATAACTCAAGGGG
GATTCAGATGTAACCCCCGAAATCAAATATGTTAGAAACTCCCCAGTATT
GAAGGCAGCATTATCATATGAGAACCAGAAACCTCAGAATTTCGTTAATT
TCCCTCAGAATTACCACTTCAGAACAAAGGTGTCACATAGGTCCTCAATA
ACTGAAGATGCCCTGATACATATGACATGATAAGCAAAGGACTTATTCAC
AGACCCCCACAACTTTTTTGTAAAGCCCCAAAGTTGGCTCTTTTTATAAT
CACAGGGAATAACATTGATGAAGTATCAAGGGGAATCCAAAGGACCCTTT
TTTAACCCAGAA

NTTCTATCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAAACAAACTGAAGA
CCAGTCTTCATTTTCCTTTACCTGGTTTTGAAAGGCCAGATTTCCAAAAT
TTGCGTATATAGGCGCCAAAGTGCTTCCAAATCCAGAGGCTCCTCTCAAC
CTCAGAAGAGCTGGTACTTCAGACATGATTCAGGGAAGGCTGTGTTTATG
TATGTGTTGTTTTGGTATAGGAAGGTAAGCTCTAACTCTGTATCTCAGTA
TTATCTTAGCACATGTGCAGTTTGGACTGGCCTTGAAAATGAAGTACTCA
GCCTTACAAATTTACTGGGGCCTAAGGAAACATGTCTTCTATATTTTTTA
TACTTAAATTTTATTTTTTATTTATTTATTTTTTCATTGTTGAAGATTGA
ATCCAGAGCTTCTTTGTGTAGCATTAAAATATAAGTCCAGTCAGGCGAAA
AGTATTTCATTATTATTTGCCAAAAAAATAATAATAATAACTGGCTTTAT
ATCCTTTGTGCATTACCTCCATGAACCGATTTTTCTCACACCATTGACTT
ATTTTTCGTATTTTCTTGCAAAACAATTGGCGATTCCCCTGTCTTATTGT
TCAATTTTTTATTTCTCTTTTTAATGGGCCCATTCCCCGCAAGTATACTT
TTTTTCTTTTTCTCTTCTTTTTTACCTTTTCCTCTTATGGTGTTTTTCTC
TCTCCTCTCCCCTTTCCC

Query= MSMg01no361_e24.b1 MSMg01no361_e24.b1 CHROMAT_FILE:
MSMg01no361_e24.b1 PHD_FILE: MSMg01no361_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:19 2005
         (476 letters)



>mm_chrX_143707497_143708371
          Length = 875

 Score =  582 bits (301), Expect = e-170
 Identities = 433/477 (90%), Gaps = 8/477 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaaaaacactccaggcattcttctctggtaaggttcagacctacagcttaagaa 63
           |||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 204 ggaattcaaatacactccaggcattcttctttagtaaggttcagacctacagcttaagaa 263

                                                                       
Query: 64  ccacagatcttctaaactactgtatggaccaagggaacttctgatatgcccattctgaac 123
           |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 264 ccacagatcttccaaactactgtatggaccaaggggacttctgatctgcccattctgaac 323

                                                                       
Query: 124 cagggattctcagatcatcacc-aatagcctaagtgaccttcatcttacctgtctagaac 182
           ||||||| | || ||| | ||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 324 cagggatcc-catatctt-acccaatagcctaagtgaccttaatcttacctgtctagaac 381

                                                                       
Query: 183 caatgtgctggggctggagagatggctcagcagttaaaagcactgacttctcttccaaag 242
           |||||||||||| ||| ||| ||||||||||||||||||||||||||| |||||||| ||
Sbjct: 382 caatgtgctgggactgaagatatggctcagcagttaaaagcactgactgctcttccacag 441

                                                                       
Query: 243 gtcctgagttcaattctcagcaatcacttcttgtact-acaaccatctgtcatgtgacct 301
           |||||||||| ||||| |||||| ||| |  ||  || |||| ||||||| ||| |||| 
Sbjct: 442 gtcctgagttaaattcccagcaaccacatggtgg-ctcacaatcatctgtaatgagaccc 500

                                                                       
Query: 302 gatgccaccttatggtgtgtctgaagacaatgacagtatacccacatacatgaaatagaa 361
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatgccactttatggtgtgtctgaagacaatgacagtatacccacatacatgaaatagaa 560

                                                                       
Query: 362 cctatgtgactcacaacttacaccaataactcaagggggattcagatgtaacccccg-aa 420
           |||||||| |||||||||| ||||||||||||||||||| |||||||||| |||||  ||
Sbjct: 561 cctatgtgcctcacaactttcaccaataactcaagggggtttcagatgta-ccccctcaa 619

                                                                    
Query: 421 -atcaaatatgttagaaactccccagtattgaaggcagcattatcatatgagaacca 476
            |||||||||||||||||||||||||| ||||||| | ||||| || ||||||||||
Sbjct: 620 catcaaatatgttagaaactccccagtgttgaaggtatcattaacacatgagaacca 676


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 875
Length adjustment: 10
Effective length of query: 466
Effective length of database: 865
Effective search space:   403090
Effective search space used:   403090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)