NTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTAGACTTTTAATTGCATATTTCAAAACTGAGATTCAATTTAATA
AATAATTTCAAAGACATTTCTGCAGTTTTAATTTTTATAATATAATTACA
CCATTTTCTCCTTTATCATTACTCAAGACCTTTCTGTAGCCTTTTTTTTC
TGTACTAGTTGGTAGCTATGTATCATAAGAATATCCTACATCCCAATACC
AAACTATGCCTAGCATGTTAGGACCCCTTCATGAATGTTATATGCTCTTA
TTGGCTCACTTAAATAATACAAATTAAAACATTTTTCTTTTTATTTATTT
TTCTCTCATTTATTACATTGAAATTGCAGTTTCCCTTGCCCCCTCCTCTC
CCACACCATTCCTGCCCACCTCACCTCTCCCTGAGATCTAGTCCATCTCA
TTTTCCTTCACAAAAGGGCAGACCTCCCCAAGGATATCAACCAAACATGG
CATATCAAGTTGTAATAAGACTAGGAATGTCTCTCATATTAAGGCTGAAA
GCAAAACCCAGTAGGAGCAAAAGAGCCAGAGACAGACACCCCCCCCCCCC
GCCTCGCTTCCACTCTTAGGAGTCCCACAAGAAGACCAAGCTATACAACT
ATAACATTTATGCAGAGGACCTATGTCAGTCCCATTCAGGCTCCCTGGGT
GTTGGTTTAGTCTCTGCGAGCCCCTATGAAAGCTGCTTAGNTGATTCTGT
GGCTTTTCTN

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGG
CAGAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATG
CAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAA
GATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAG
GAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGG
AAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGA
TCCAGCAATACCTCTCCTGGGCATTTATCCAGAAGATGCCCCAACTGGTA
TGAAGGACACATGCTCCACTATGTCCATAGCAGCCTTATTTATAATAGCC
AGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAA
NATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATG
AATTTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTG
AGTGAGGTGACACATTTCTCAAGGAACTCACACCATATGGACTCCCTGAA
TAGTGAAGATTAGCCCCAACCTAGGATTCCCCAGAAATAAGGGACATTTG
GTTAACACCTGAAACTCCCAAAAAAAGAAACTGGAGGGGCGACCAAGCCC
CCCCCTTATATTGGGGAAGAAAAACCCTGG

Query= MSMg01no361_h12.b1 MSMg01no361_h12.b1 CHROMAT_FILE:
MSMg01no361_h12.b1 PHD_FILE: MSMg01no361_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:31 2005
         (632 letters)



>mm_chrX_136055502_136056533
          Length = 1032

 Score = 1149 bits (594), Expect = 0.0
 Identities = 616/628 (98%), Gaps = 9/628 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagacttttaattgcatatttcaaaactgagattcaatttaataaataatttca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagacttttaattgcatatttcaaaactgagattcaatttaataaataatttca 264

                                                                       
Query: 65  aagacatttctgcagttttaatttttataatataattacaccattttctcctttatcatt 124
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 aagacatttctgcagttttaatttttataatataattataccattttctcctttatcatt 324

                                                                       
Query: 125 actcaagacctttctgtagccttttttttctgtactagttggtagctatgtatcataaga 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actcaagacctttctgtagccttttttttctgtactagttggtagctatgtatcataaga 384

                                                                       
Query: 185 atatcctacatcccaataccaaactatgcctagcatgttaggaccccttcatgaatgtta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atatcctacatcccaataccaaactatgcctagcatgttaggaccccttcatgaatgtta 444

                                                                       
Query: 245 tatgctcttattggctcacttaaataatacaaattaaaacatttttctttttatttattt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatgctcttattggctcacttaaataatacaaattaaaacatttttctttttatttattt 504

                                                                       
Query: 305 ttctctcatttattacattgaaattgcagtttcccttgccccctcctctcccacaccatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctctcatttattacattgaaattgcagtttcccttgccccctcctctcccacaccatt 564

                                                                       
Query: 365 cctgcccacctcacctctccctgagatctagtccatctcattttccttcacaaaagggca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cctgcccacctcacctctccctgagatctagtccatctcattttccttcacaaaagggca 624

                                                                       
Query: 425 gacctccccaaggatatcaaccaaacatggcatatcaagttgtaataagactaggaatgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gacctccccaaggatatcaaccaaacatggcatatcaagttgtaataagactaggaatgt 684

                                                                       
Query: 485 ctctcatattaaggctgaaagcaaaacccagtaggagcaaaagagccagagacagacacc 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 ctctcatattaaggctgaaagcaaaacccagtaggagcaaaagagccagagacagac-cc 743

                                                                       
Query: 545 ccccccccccgcctcgcttccactcttaggagtcccacaagaagaccaagctatacaact 604
           ||||         || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cccct--------tcacttccactcttaggagtcccacaagaagaccaagctatacaact 795

                                       
Query: 605 ataacatttatgcagaggacctatgtca 632
           ||||||||||||||||||||||||||||
Sbjct: 796 ataacatttatgcagaggacctatgtca 823


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space:   635684
Effective search space used:   635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)