ACTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGTTTAGTTCTGTACCTCTCTTTACATTATTACTTGGTTTGTT
GTTATCTAATTTCTTGAGATTTTTATGTATTTTGGCTATCAGCCCTCTGT
TAGATGAAGGTTTGATGAAGATCTTTTCCAAATCGATATGCTGATATTTT
GTCTTATTCATAGTGAGATTCTAATTATTGATTGCTAATCTAATCCTCCA
ATTCTTAGAAAACCTCTACCCTTTTAATTTGGGGATTATAATGACCTACA
TATCCTATTTTCAGGGCTGTTCTTTCAAATCTCACTTTAGGGAGATAGCC
ATGTTTAAAAGAAAATAAAGTTTGCTTAATTTGAAAAGAAACATGTTTGT
GTTAATGGCCTTATACTCTTTCAGTGGGATTACCAATCATTACAGTAAGA
CAATGGCCGTGAGCATATTAGTAGAAGCAGACAGCTAAGAGACCATATCC
TCAAGTACAAGTATAAATAAAGTAAAAAGACAATGAACTGACTATTTTAT
GGGATATTAAGCTCTCAAACTTTGCTTCCAGTGACTTACTTCCTCCAGAT
ATACTGCTGAGACATTCCCAGCAGTGTCAACAACTTGGGTCCAAGTGTTC
CACAATCTGAGGCTATAAGGGGACATTCTCATTTAAAACAAAACAAAGAA
ATAAGACTATATATTGGCCCTAATTGTGATTCTTATTAGACTAAGACTGA
CACACTTGTC

NCGATGCAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAG
AGAAGCACCTGAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTGAGATTCAACCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGAGGATGCTGGCGTGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAAAA
GGACACATGCTCAACTATGTTCATAGCAGCCTTATTTATAATAACCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATG
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCTCCAGGTCCATCCATTTGGCTAGGAATTTCATAA
AATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATGTACT
CACTGATAAGTGGATATTAGCCTCCAACCTAGGATTCCCAGATATAAGAT
ACAATTTGCTAACACATGACACTCAAGAAGAATGAAGACTGAAGGGTGGA
CCCATGCCCCTTCTTA

Query= MSMg01no361_n19.b1 MSMg01no361_n19.b1 CHROMAT_FILE:
MSMg01no361_n19.b1 PHD_FILE: MSMg01no361_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:01 2005
         (599 letters)



>mm_chrX_120229858_120230856
          Length = 999

 Score =  988 bits (511), Expect = 0.0
 Identities = 574/595 (96%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtttagttctgtacctctctttacattattacttggtttgttgttatctaatt 64
           ||||||||||||  ||||||| |||||||| ||| ||||||||||||||||||| |||||
Sbjct: 779 gaattctgtttaactctgtacttctctttaaattgttacttggtttgttgttatttaatt 720

                                                                       
Query: 65  tcttgagatttttatgtattttggctatcagccctctgttagatgaaggtttgatgaaga 124
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 719 tcttgagatttttatgtattttagctatcagccctctgttagatgaaggtttgatgaaga 660

                                                                       
Query: 125 tcttttccaaatcgatatgctgatattttgtcttattcatagtgagattctaattattga 184
            |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 659 ccttttccaaatctatatgctgatattttgtcttattcatagtgagattccaattattga 600

                                                                       
Query: 185 ttgctaatctaatcctccaattcttagaaaacctctacccttttaatttggggattataa 244
           ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 599 ttgctaatctaatcctccaattcttggaaaacctttacccttttaatttggggattataa 540

                                                                       
Query: 245 tgacctacatatcctattttcagggctgttctttcaaatctcactttagggagatagcca 304
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 539 tgacctacatatcctattttcaggactgttctttcaaatctcactttagggagatagcca 480

                                                                       
Query: 305 tgtttaaaagaaaataaagtttgcttaatttgaaaagaaacatgtttgtgttaatggcct 364
           |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 479 tgtttaaaagaaaataaattttgcttaatttgaaaagaaacatgtttgtgttgatggcct 420

                                                                       
Query: 365 tatactctttcagtgggattaccaatcattacagtaagacaatggccgtgagcatattag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tatactctttcagtgggattaccaatcattacagtaagacaatggccgtgagcatattag 360

                                                                       
Query: 425 tagaagcagacagctaagagaccatatcctcaagtacaagtataaataaagtaaaaagac 484
           ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 359 tagaagcagacagctgagagaccatatccacaagtgcaagtataaataaagtaaaaagac 300

                                                                       
Query: 485 aatgaactgactattttatgggatattaagctctcaaactttgcttccagtgacttactt 544
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aatgaactgactattgtatgagatattaagctctcaaactttgcttccagtgacttactt 240

                                                                  
Query: 545 cctccagatatactgctgagacattcccagcagtgtcaacaacttgggtccaagt 599
           ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 239 cctccagatatactgctgaaacattcccagcagtgtcaacaacttgggtccaagt 185


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space:   582521
Effective search space used:   582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)