XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCA
CCTGAGTAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATC
CTTAATCATCAGGGAAATGCAAATCAAAACATCCTTGAGATTCCACCTCA
CTGCAGTCAAAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGT
CGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAA
GCTTGTACAACTACTCTGGAAATCAGTGTGGCGGTTCCTCAGAAAATTGG
ACATAAAACTACTGGAAGATCCAGCAATACCTTTCCTCGGCACCCAGAAG
ATTTTCCAATGGGTGGTAAGGACACATGCTCTAGGATGTTCATAGCAGCC
TTATTTATAATAGCAAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGA
GGAACGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAG
CTATTAAAAAGAATGAATTTATGAAATTCCTAGTCAAATGGATGGACCTG
GAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAGGCACTCACAAAA
TATGTACTCACTGATAAGTGGATATTATCCCAGAAACTTAGCATACCCAN
GATATAAGATACCATTTGCTAACCGCATGGAACTCCAGAGAAACAAAACC
AAGGGTGGGAACTTTGCCCCTTATTAAATTGGGAAAAAAACCCCTGGAAG
GGTTTCCGAACCA

TCAATGTATTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAAATCACAAGAAGTCAGACTGAGG
TTGTATCTCAGTTGATAGAGTGAAAATATAGTGTCCATAGAGCCTTAGGT
TTAATTCCTAACCATGACAGAAGAGCCTGAAGTTCAATGTCATCCTCAGC
TACATAACCAGTGAAGGCTAACTTGAGAAACACAACACCCTGGCTATAAA
TAATTAAAAAAATAAAGAAATGCATCGAGAAGAGAATAAAAGCACATGTA
CACAAAAATATAAACTCTGTCTATTTTGATCATCAATGGCTTTTAAATCT
GTAGGATCTTTTGTGCAATCTCCATAAATGCCAAAATAAATACACTGATA
CATATTTAATTGGGCAGGTATTCTAGCTTCCTTTAATCTACTTGAATCTC
AGCTTTCTCAGTCAGTAATTTAATTTTGAAATGAAATTGCTTAAGGTTAA
ACAGTTATTACAGTGTGTACTAATTTCCTGACATTGTATTTTCTGATTGA
TATAAATGTTCTACTTACAGACATTATATCAGGTAAGAATTATAGCAGGA
AAATTGTATTCACAGACTAATCATGCACTTTTATAGTTATATTTGTATTG
GTATTATATTAAGATACCATTCTGTTTGCCTTGAAAAAGACTATGGACCA
AAACAGTTAGGGGAGGAAAGTGCTTATTTGTCTTACATGCTTAGATCA

Query= MSMg01no363_i24.g1 MSMg01no363_i24.g1 CHROMAT_FILE:
MSMg01no363_i24.g1 PHD_FILE: MSMg01no363_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:19 2005
         (537 letters)



>mm_chrX_105028966_105029900
          Length = 935

 Score =  994 bits (514), Expect = 0.0
 Identities = 530/536 (98%), Gaps = 3/536 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaatcacaagaagtcagactgaggttgtatctcagttgatagagtgaaaatatagtgtcc 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaatcacaagaagtcagactgaggttgtatctcagttgatagagtgaaaatatagtgtcc 262

                                                                       
Query: 62  atagagccttaggtttaattcctaaccatgacagaagagcctgaagttcaatgtcatcct 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atagagccttaggtttaattcctaaccatgacagaagagcctgaagttcaatgtcatcct 322

                                                                       
Query: 122 cagctacataaccagtgaaggctaacttgagaaacacaacaccctggctataaataatta 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 323 cagctacataaccagtgaaggctaacttgagaaacacaacaccctggctataaataatt- 381

                                                                       
Query: 182 aaaaaataaagaaatgcatcgagaagagaataaaagcacatgtacacaaaaatataaact 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
Sbjct: 382 aaaaaataaagaaatgcatcgagaagagaataaaagcacatgtacacaaaaatataaa-- 439

                                                                       
Query: 242 ctgtctattttgatcatcaatggcttttaaatctgtaggatcttttgtgcaatctccata 301
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgtcaattttgatcatcaatggcttttaaatctgtaggatcttttgtgcaatctccata 499

                                                                       
Query: 302 aatgccaaaataaatacactgatacatatttaattgggcaggtattctagcttcctttaa 361
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aatgccaaaataaatactctgatacatatttaattgggcaggtattctagcttcctttaa 559

                                                                       
Query: 362 tctacttgaatctcagctttctcagtcagtaatttaattttgaaatgaaattgcttaagg 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tctacttgaatctcagctttctcagtcagtaatttaattttgaaatgaaattgcttaagg 619

                                                                       
Query: 422 ttaaacagttattacagtgtgtactaatttcctgacattgtattttctgattgatataaa 481
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttaaacagttattacagtgtgtactaatttcctgacattgtattttctgattgatataaa 679

                                                                   
Query: 482 tgttctacttacagacattatatcaggtaagaattatagcaggaaaattgtattca 537
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 680 tgttctacttacagacattatatcagttaagaattatagcaggaaaattgtattca 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 935
Length adjustment: 10
Effective length of query: 527
Effective length of database: 925
Effective search space:   487475
Effective search space used:   487475
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)