NTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCACAAACCCACTTGGAGGTTAAACAACACATCTATTAAAAGTAAA
GTGCTTTTCTTACTGGCAATCATATTCTTTGGAACTGTTTCATAGTTAAA
ATAATAATGCAACTTTAATATTTTATATGTAAGACTGAGTGTTAGAAAAA
CGTTAATCATTTCAGGCTTCATTTCTTTTTGCTGTTGTTTCTGTTTTTGA
ATGTACTGGCTGGATTAATCTGGAGAGTATTATCGGTAACTGTTAAGAAT
GTTTTTTTGAATATTTATGCCTTTAAAACATACTTTTGTTTCCCTTGCTT
GTCCATATTTTTATACTACTCCATTCAATTCTCATTCTACCTGCCCTAAT
GAAATTCCAGTATTTCTATCAAAGATCCCAATATATATGTATACAATGAA
GAATAGGAATAAAAATTAGTAAACTACGAAAACTCACTTTACTATTAACA
CCACTTTAGCATCACTATTCTTGATTTGCCACTTTAATGACCAATAAACC
ATTTTCACAAATGTGGTGATACAACCGAGTCCATGCCCCTTTATGTACAG
CCCCTGTGCGGGTGAGCTTATATTAATTGTTACCTATTAACCGCGCGCGT
ACCCGTTAACCTATTATTTTTCATCCTGTCAATTTCCATTTGGTATTACG
CTCTCCTTATATGCTACCTTGTTCCCTGTTTTTCTTTCTTTTATTTCTTT
ATACCCTTTCTTACATTACCTTTTTATGCTCTTTATCTA

NCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCCATTTAGTTCTGTATCCCATTT
TTTTGATTAGGTTGTTTGTCCTATTAGGGGTTAGCTTCTTGAGTTCTTTA
TATATTTTAGATATTATCCCTCTATCAGATGTGGGATTAGTGAAGATTTT
TTTCCCAATCTATAGGTTGCCAATGTGTTTTATTCACTATGTCCTTTGCC
TTACAGAAGATTTCAAGTTTCATGAGGTCCCATTTATCAATTCTTGATCT
TAAAGCAAGAGCCATTTGAGTTCTGTTTAGAAAATTTCCCCCTGTGCCAA
TGAGTTCAAGGCTCTTTCACACTTTTTCTTCTATTACATTCAGTGTTTTA
TGTTAAAGTCCTTGATCCTCTTGCACTTGAGTTTTGGTTCTGGTGACTGA
TATGGGCGCTATTTCCGTTGTCTACTTGTCGATTCGTGTTCATGCCGGTC
AATTTATAGACGTTGGGCGTCGTGTTTTCGATGTTCTTGTTTTGGCTCCG
ATGGCCATGAGTTTGTGTCCCGTCTTTTGTTTTCTCGTCTCTTTAACCTC
TCTTTTGTTGTCTCTATCCTCGTTTTTTCTCACCCACTCCTTTTTTTTTT
TCTCCACTCTTATTCGTTTTCTTTCCGTTCTTTTCTTTCGTTTTTTTTCT
CGTACCACTCCTCCTTTTTTCTTCTTTTTCTCCTCATTCTTTTTCTCTTC
TTTTTTGTCCCCTCTCTCTTCTCA

Query= MSMg01no364_d02.b1 MSMg01no364_d02.b1 CHROMAT_FILE:
MSMg01no364_d02.b1 PHD_FILE: MSMg01no364_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:12 2005
         (464 letters)



>mm_chrX_37836747_37837608
          Length = 862

 Score =  812 bits (420), Expect = 0.0
 Identities = 450/460 (97%), Gaps = 2/460 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccacaaacccacttggaggttaaacaacacatctattaaaagtaaagtgcttttc 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 662 gaattccacaaacccacttggaggttaaacaacacatctattaaaagtaaagtgctttac 603

                                                                       
Query: 65  ttactggcaatcatattctttggaactgtttcatagttaaaataataatgcaactttaat 124
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 602 ttactggcaatcatattctttggaactgtttcatagttaaaataatgatgcaactttaat 543

                                                                       
Query: 125 attttatatgtaagactgagtgttagaaaaacgttaatcatttcaggcttcatttctttt 184
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 542 attttatatgtaagactgagtgttagaaaaacgttaatcatttcagccttcatttctttt 483

                                                                       
Query: 185 tgctgttgtttctgtttttgaatgtactggctggattaatctggagagtattatcggtaa 244
           ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 tgctgttgtttctgttttttaatgtactggctggaataatctggagagtattatcggtaa 423

                                                                       
Query: 245 ctgttaagaatgtttttttgaatatttatgcctttaaaacatacttttgtttcccttgct 304
           ||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 422 ctgttaaga-t-tttttttgaatatttatgcttttaaaacatacttttgtttcccttgct 365

                                                                       
Query: 305 tgtccatatttttatactactccattcaattctcattctacctgccctaatgaaattcca 364
           ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 364 tgtccatatatttatactactccattcaattctcattctaccagccctaatgaaattcca 305

                                                                       
Query: 365 gtatttctatcaaagatcccaatatatatgtatacaatgaagaataggaataaaaattag 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtatttctatcaaagatcccaatatatatgtatacaatgaagaataggaataaaaattag 245

                                                   
Query: 425 taaactacgaaaactcactttactattaacaccactttag 464
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 taaactacgaaaactcactttactattaacaccactttag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 862
Length adjustment: 10
Effective length of query: 454
Effective length of database: 852
Effective search space:   386808
Effective search space used:   386808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)