Query= MSMg01no365_c23.b1 MSMg01no365_c23.b1 CHROMAT_FILE:
MSMg01no365_c23.b1 PHD_FILE: MSMg01no365_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:37 2005
(474 letters)
>mm_chrX_112889914_112890787
Length = 874
Score = 903 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 4 ggaattccttcagtaccatgtagttgggaattacccccaccagggttcttcctctgcttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttcagtaccatgtagttgggaattacccccaccagggttcttcctctgcttg 263
Query: 64 attggagaccagactgtctgtgcatagcccattgccccacaataaaggtgaaacttgtgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attggagaccagactgtctgtgcatagcccattgccccacaataaaggtgaaacttgtgg 323
Query: 124 tcaatatttaaatttaaataagcaggacacaagaaccctatgtattattagaatctacaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcaatatttaaatttaaataagcaggacacaagaaccctatgtattattagaatctacaa 383
Query: 184 ataaaattgaacttgaaatgaaagtagcaagtctacctgagaacaggaaggtaaagggag 243
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ataaaattgaacttgaattgaaagtagcaagtctacctgagaacaggaaggtaaagggag 443
Query: 244 gcttaaaaaatgtaagtagggagaaaagaagaaaatataaagacaaatatgttataaata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcttaaaaaatgtaagtagggagaaaagaagaaaatataaagacaaatatgttataaata 503
Query: 304 cattttgcccatttatgaaaattttataatgaagcacattattttgtacaattgcaaaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cattttgcccatttatgaaaattttataatgaagcacattattttgtacaattgcaaaca 563
Query: 364 ttatatttaaaagcataaatactccaaattttaatggtttagtaaaattgtacatcaata 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttatatttaaaagcataaatactccaaattttaatggtttagtaaaattgtacatcaata 623
Query: 424 tatttaaaactgtacaacatacactttttactaccaagaatatatttctga 474
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tatttaaaactgtacaacatacactttttactaccaagaatatatttctga 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_c23.g1 MSMg01no365_c23.g1 CHROMAT_FILE:
MSMg01no365_c23.g1 PHD_FILE: MSMg01no365_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:37 2005
(478 letters)
>mm_chrX_113067773_113068648
Length = 876
Score = 737 bits (381), Expect = 0.0
Identities = 412/431 (95%), Gaps = 16/431 (3%)
Strand = Plus / Minus
Query: 1 actgttcataagaaggtttttttttaacagcctactctttttgtctgacctgacattgca 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actgttcataagaagg-ttttttttaacagcctactctttttgtctgacctgacattgca 371
Query: 61 tagattgcatgcattttatcagttgtgagtttataggtgccatcttccctgctaagtttg 120
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 370 tagattgcatgcattttatcagttgtgagtttataggtg-catcttcccggctaagtttg 312
Query: 121 gacatctggttccttgcagtcattcatggcctcaaactcttacaatccttctgtgccctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gacatctggttccttgcagtcattcatggcctcaaactcttacaatccttctgtgccctt 252
Query: 181 ttacattaatttgccccatttcatggtctgtatactcacattatcattcaaaaaaaaaa- 239
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 251 ttacattaatttgccccatttcatggtctgtatattcacattatcattcaaaaaaaaaaa 192
Query: 240 -------------aaagaaaggaagaaagaaagaaagaaagaaagaaagaaagaaaagaa 286
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaagaa 132
Query: 287 aagaaaaaggcaaaactctgctttagagaacacacaaatgtatgctcctttataaaacaa 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aagaaaaaggcaaaactctgctttagagaacacacaaatgtatgctcctttataaaacaa 72
Query: 347 aattacaaacaaaatcacaacaaaatagaagttttatttaagtttagttgtgaaaatgag 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 aattacaaacaaaatcacaacaaaatagaagttttatttaagtttagttgtgaaaatgag 12
Query: 407 caaactctgaa 417
|||||||||||
Sbjct: 11 caaactctgaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 876
Length adjustment: 10
Effective length of query: 468
Effective length of database: 866
Effective search space: 405288
Effective search space used: 405288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
