Query= MSMg01no366_m19.b1 MSMg01no366_m19.b1 CHROMAT_FILE:
MSMg01no366_m19.b1 PHD_FILE: MSMg01no366_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:44 2005
(547 letters)
>mm_chrX_111569995_111570939
Length = 945
Score = 1004 bits (519), Expect = 0.0
Identities = 537/543 (98%), Gaps = 2/543 (0%)
Strand = Plus / Plus
Query: 5 gaattctttttatctggcagatacattgtaaaagagatatattatgaatgcaagcctgaa 64
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttttaactggcagatacattgtaaaagagatatattatgaatgcaagcctgaa 264
Query: 65 attgcttatattttgtggttttccccagattaaaagaaaaaaagagcattgctttagtag 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 265 attgcttatattttgtggttttccccagattaaaagaaaaaa-gagcattgctatagtag 323
Query: 125 caaggctgtggacttccctttattttatagattctcacatagttataatatataaaatgt 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 324 caaggctgtggacttccctttattttatagattctcacatagttataataaataaaatgt 383
Query: 185 gacttctcattgttacttaataacagtttggcatcttccaaaactctagtaggtatgata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacttctcattgttacttaataacagtttggcatcttccaaaactctagtaggtatgata 443
Query: 245 tttaaaccaggatatagacaggacatcaaagagttttgttagcatgtagaaatgctgtga 304
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 444 tttaaaccaggat-tagacaggacatcaaagagttttgttagcatgtaaaaatgctgtga 502
Query: 305 tatctttctataagacaatctctcattatttttggtctataactcgtaaataagcaaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tatctttctataagacaatctctcattatttttggtctataactcgtaaataagcaaaag 562
Query: 365 ttctcctttttataactttatactttcaataatagaagtacaattataatgaatatagca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttctcctttttataactttatactttcaataatagaagtacaattataatgaatatagca 622
Query: 425 aaaatagaaacattttggaataacccttatgtagtaggcaaaatttatttgagatcaaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 aaaatagaaacattttggaataacccttatgtagtaggcaaaatttatttgagatcaaca 682
Query: 485 gattgttgcattcatagaaagttcattatttttaatgataagtaatacattacaataaag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gattgttgcattcatagaaagttcattatttttaatgataagtaatacattacaataaag 742
Query: 545 aca 547
|||
Sbjct: 743 aca 745
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 945
Length adjustment: 10
Effective length of query: 537
Effective length of database: 935
Effective search space: 502095
Effective search space used: 502095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_m19.g1 MSMg01no366_m19.g1 CHROMAT_FILE:
MSMg01no366_m19.g1 PHD_FILE: MSMg01no366_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:44 2005
(504 letters)
>mm_chrX_111715859_111716762
Length = 904
Score = 938 bits (485), Expect = 0.0
Identities = 500/505 (99%), Gaps = 2/505 (0%)
Strand = Plus / Minus
Query: 1 tattccctactttcttcagtatcagattccggatatcagatattatcctgaggttcttga 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 902 tattccctactttcttcagtatcagattccagatatcagatattatcctgaggttcttga 843
Query: 61 tcaattagggattgtgttttctacagaatgaaagctaagtatctagttatattctgttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 tcaattagggattgtgttttctacagaatgaaagctaagtatctagttatattctgttat 783
Query: 121 gtgttactgtccagtttgaccagtataatttgttgcagaaactcttttatacagtgtgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gtgttactgtccagtttgaccagtataatttgttgcagaaactcttttatacagtgtgta 723
Query: 181 tttctggcttctttagcagcacaggcagggtgattctgacagttttactatatttttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttctggcttctttagcagcacaggcagggtgattctgacagttttactatatttttctt 663
Query: 241 tgattatctagcaagaaagcctcttacaattacccagactg-ttttttttttctgatgtc 299
|||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 662 tgatta-ccagcaagaaagcctcttacaattacccatactgtttttttttttctgatgtc 604
Query: 300 acttcacattgatttcattttaaaagggtaagaaattgtgttcaatgtaagaaatgggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 acttcacattgatttcattttaaaagggtaagaaattgtgttcaatgtaagaaatgggct 544
Query: 360 tttttcaacagacagtgttagaagaaataattattcatgaaaagaagagatctgtgaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tttttcaacagacagtgttagaagaaataattattcatgaaaagaagagatctgtgaatc 484
Query: 420 taaacccctacacaaaactaatttgtgatatacacttaacagtacatattaactccagac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 taaacccctacacaaaactaatttgtgatatacacttaacagtacatattaactccagac 424
Query: 480 agtttctgcattaaaacataagaaa 504
|||||||||||||||||||||||||
Sbjct: 423 agtttctgcattaaaacataagaaa 399
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
