NCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTACTGTGCTGTGTTCCTGGGTATAAGTAAACCTTAATCTGTTAAA
AAAAACACTAAAATAAAATAAATCAAGCAGCTTCTGTAAACAAGTCTTAC
ATGTTTTCAAAAAGAGGAAACTGTCATGGCTATGCTGCTTTCAATAGATA
TGTCTAGTTTTGGTTCTGTTTTGCTTATAGGATTTTAATGACCTCAGTAT
TTGGCACATGGGAGGTGAAAGCCTATTTTTTTACAGGCTGAAGATGGGGG
ATTGATGATCTGTGGGAAACTTAAATGCCAGAAAAACCCCCACTAATTGG
TAAGAACAGCTATCAAATTTTTGTCAGGAGATTCAGAGGAGTGGTGATAG
GTCTAGAACCCTGATAAATTCACAGCAATAGTTATGTTCTTCGAAAATAT
AGAGAGAGCTTTGTTTTAGAAAGACAGGAGATTATTGAAAAAACAAAAAA
ATTAATATTGACCACTGGATTCTATATATAATTTCTATATAATATCTTAT
ATATTATATACTATATACATTCTATATAGAATATATAGATATTCAGTGGA
AAGGAGGACATATATAGAGATGTTTGTGGTTGATGATTGGCATATAAGTC
AGTTGCAGAACACATGCTTATCATTCTTGAGGCCCCAGATTTGTTCCCCT
AAACAAACACCACCCACACCCTCCCATAAAATAATTTTTTTATTTTGGTA
AAAAGTATGCCCCCACCATTCGTTCG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXATCATCTGATTCAGAGCTACCAAGAGCTGGCTCCTTGAGCTCATC
TAGTGATGAGTATAGGCTCCTTCTCCTAGAGACCTCCGCTAATTGATCTT
TTTTCTTTTCTTTTTTCTTTTCCTTCCTTCTAATCTCTCCCCAGGTATTC
TTACCTGACCTTAACTTTTCCTCAGGTTCAAGACCCTTGGAAAGGCCTGT
ATACTTAGTTTGTGTACCATATTTCCTCTTTGCTCCTACTCTTTCTCCCC
GCTTTACTTCTGATAGATTGCCCTGAATTTCATCCAGAATTTTCAGCCCC
GCCTTAACCACTTGATAACATGTGAAAAGGAACAAAAAGGCTCCTAACAC
TAGAAAAAGTTCAAGGCCAAACATACCTTGTAAAGCTATTTCCCACTTTA
CTTCTGATAGACTGTCTTGAATTTCATTAGAAAGTTCAAGACCAGACTTA
CCTTGTAAAGCTGTACTCACTGGTACCCCTGTTCCCCAGCTGAAGAGTTC
TGAATTCATGCAGTTGAATCCTTCTCAACAGTCTGTTTTACAGGAACACT
TCATTACCACCATTCCCCAGCTGAAGAGTTCTGAATTCACGCAGTTGAAT
CCTTCTCAACAGTCTGGTTTACGGGGACACTTCATTACCATGACCCGCAG
TTCTGGGTCCGGGAAGAGGGAACTTCCTTGCGTCGGGGAGGGAAACCGCC
C

Query= MSMg01no367_m10.b1 MSMg01no367_m10.b1 CHROMAT_FILE:
MSMg01no367_m10.b1 PHD_FILE: MSMg01no367_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:02 2005
         (549 letters)



>mm_chrX_95727347_95728297
          Length = 951

 Score = 1036 bits (536), Expect = 0.0
 Identities = 543/546 (99%), Gaps = 2/546 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   aattactgtgctgtgttcctgggtataagtaaaccttaatctgtt--aaaaaaaacacta 63
           ||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 677 aattactgtgcagtgttcctgggtataagtaaaccttaatctgttaaaaaaaaaacacta 618

                                                                       
Query: 64  aaataaaataaatcaagcagcttctgtaaacaagtcttacatgttttcaaaaagaggaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 aaataaaataaatcaagcagcttctgtaaacaagtcttacatgttttcaaaaagaggaaa 558

                                                                       
Query: 124 ctgtcatggctatgctgctttcaatagatatgtctagttttggttctgttttgcttatag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctgtcatggctatgctgctttcaatagatatgtctagttttggttctgttttgcttatag 498

                                                                       
Query: 184 gattttaatgacctcagtatttggcacatgggaggtgaaagcctatttttttacaggctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gattttaatgacctcagtatttggcacatgggaggtgaaagcctatttttttacaggctg 438

                                                                       
Query: 244 aagatgggggattgatgatctgtgggaaacttaaatgccagaaaaacccccactaattgg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aagatgggggattgatgatctgtgggaaacttaaatgccagaaaaacccccactaattgg 378

                                                                       
Query: 304 taagaacagctatcaaatttttgtcaggagattcagaggagtggtgataggtctagaacc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 taagaacagctatcaaatttttgtcaggagattcagaggagtggtgataggtctagaacc 318

                                                                       
Query: 364 ctgataaattcacagcaatagttatgttcttcgaaaatatagagagagctttgttttaga 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgataaattcacagcaatagttatgttcttcgaaaatatagagagagctttgttttaga 258

                                                                       
Query: 424 aagacaggagattattgaaaaaacaaaaaaattaatattgaccactggattctatatata 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagacaggagattattgaaaaaacaaaaaaattaatattgaccactggattctatatata 198

                                                                       
Query: 484 atttctatataatatcttatatattatatactatatacattctatatagaatatatagat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atttctatataatatcttatatattatatactatatacattctatatagaatatatagat 138

                 
Query: 544 attcag 549
           ||||||
Sbjct: 137 attcag 132


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 951
Length adjustment: 10
Effective length of query: 539
Effective length of database: 941
Effective search space:   507199
Effective search space used:   507199
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)