XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAATG
GATACTTCATATTTTCATTTATTTTAACTTTCTTTTTATTACTAATTAAA
ACACTAATTCAGATAGTGACTTGTCTAATTTATATGTTCATTAAAGCACT
CAAAGATTTTCTTAATGAAATGTATTAAGAAATGTAAAGCCAAGCTTAAA
GAAATAAAACGAAAAGAAAGAAACAAAAACAAACAAGCTTTTTTTTTCTT
TTTTAATATTTTTTATTAGGTATTTTCCTTATTTACATTTCTAATTCTAT
CCCAAAATCCCCCATACCCTCCCGCCCACTTCCCTACCCACCCATTCCCA
TTTTTTTTTTTTTTTTTTTGGCCCTGGTGTTCCCCTGTACTGGGGCATAT
AAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGC
CATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTT
AGTTCATATTGTTGTTCCACCTAAATAAGCTTCTTTAAGATGACTATGAG
ACTAAAAGTTTTTTCTTAATTCCCCAAAAATATATAGTACAACTAACATT
AGTATTAGTTTAAGAAAGTGATATTGTAAGTTTTTATATAAGAATTTTAT
TGGGCAAAAGTTTTGTATAAAAAATGATTTACAAAATTTGTTTTAATGGG
GACTTTTAAAATCCGGAATTATTTGATGGGGTTGGGGTCCATTTCCCTCC
ATAAGGGATAAA

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTGTAGATCTGTACCCCACTT
TTAATGGGGTTACTTGAATTTCTGGAGTTCAGCTTCTTGAGCTCTTTGTA
TATATTGGATATAAGTCACCTATCAGATTTAGGATTGATACAAATCCTTT
CCCAACCTTTTGGTGGCCTTTTTATCTCATTGACAGTATCTTTTGCCTTA
CATAAGCTTTGCAATTTTATGAGATCCCATTTGTTGATTCTTGATCTTAC
AGCACAAGCCATTGCTGTTCAGTTTAGGAATTGTTCCCCTGTGCTCATAT
CTTCGAGGCTTTTCCCGAATTTCTCCTTTATAAATTTCAGTGTCTTTAGT
TTTATGTAGAGTTCTTTGATTCACTTAGACTTGAGCTTTGTACAAGAAGA
TAAGAATCGATCAATTCACATACTTCTACATGATAACTGCCAGTTTGTAC
CACCACCATTTCTTGAAAAAGTAGTATTTTTTTTCCACTGGATGCTTTTA
GCTCCCTAGTCAAAGATCAAGTAACCATATGTGTGTGGATTCATTTCTGC
ATTTTCAATTCTATTCCATTGATCTACCTGTCTGTTGCTGTACCAGTACC
ATGCAAGGTTTGTCACATTGCTCTGTANTACAGGTTTAGGTCAGGCATGG
TGCTTCCACCAAGGATCTTTTATCCTTGAAAGGGGTTTTGTATCCCCGCT
TTTTTGTTTTT

Query= MSMg01no367_m15.b1 MSMg01no367_m15.b1 CHROMAT_FILE:
MSMg01no367_m15.b1 PHD_FILE: MSMg01no367_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:03 2005
         (462 letters)



>mm_chrX_115899642_115900503
          Length = 862

 Score =  733 bits (379), Expect = 0.0
 Identities = 401/411 (97%), Gaps = 5/411 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaatggatacttcatattttcatttattttaactttctttttattactaattaa 64
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gaattccaatggagaattcatattttcatttattttaactttctttttattactaattaa 352

                                                                       
Query: 65  aacactaattcagatagtgacttgtctaatttatatgttcattaaagcactcaaagattt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aacactaattcagatagtgacttgtctaatttatatgttcattaaagcactcaaagattt 292

                                                                       
Query: 125 tcttaatgaaatgtattaagaaatgtaaagccaagcttaaagaaataaaacgaaaagaaa 184
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 291 tcttaatgaaatgtattaagaaatgtaatgccaagcttaaagaaataaaacgaaaagaaa 232

                                                                       
Query: 185 gaaacaaaaacaaacaagctttttttttcttttttaatattttttattaggtattttcct 244
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 231 gaaacaaaaacaaacaagctttttttttctttttcaatattttttattaggtattttcct 172

                                                                       
Query: 245 tatttacatttctaattctatcccaaaatcccccataccctcccgcccacttccctaccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 tatttacatttctaattctatcccaaaatcccccataccctcccgcccacttccctaccc 112

                                                                       
Query: 305 acccattcccattttttttttttttttttt-----ggccctggtgttcccctgtactggg 359
           |||||||||| |||||||||||||||||||     |||||||||||||||||||||||||
Sbjct: 111 acccattccctttttttttttttttttttttttttggccctggtgttcccctgtactggg 52

                                                              
Query: 360 gcatataaagtttgcatgtccaatgggcctctctttccagtgatggccgac 410
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  gcatataaagtttgcatgtccaatgggcctctctttccagtgatggccgac 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space:   385104
Effective search space used:   385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)