CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCCTAAAATTCCGGGAATTTGGGGCACCTGTGAGGAATTTTTTTTCCT
GATTTGATTATGTGAAATAGGAAGACCAACCCCAAATCTAGATCGTTTGT
TCTGTTGTAGAAACAACTCTACAATATAAATTTCATTGATGTTAGTTTTT
TAATAAAAGTGTGTAGCTAGGACTAAATTCTAGTAGTTACAATCAAGATT
GTTTTTATGATCCTGCACTGTTTCTGTCTTTTATTACAGTGTTTCCTGAA
CACTGAGGTGGAGATTTGATGGTGACCTCCCTTGTAGGACTGAATGTTAG
AAGGTCCCTCAGGCTTTGCATATTATCTGGCTGCAAGTCTCTGTATTTGT
TTCCATCTGCTGCATGAGGATACTTCTGTGATGATGAATGAGCAAGATAC
AGACCTGTGAGTATAGCAAAATGTCAACAGGAGTCATTTAACTGCTATAA
TCCTTTAGTAGAATAGTAGTATTTGGTCTTTCTCTAGATCCCTGGCATTT
CTAGTTTCAGGTTCTTGGCCATTCAAGCATTGTTGAGTATGGATTCCACT
TAATGATATCTGTGATTGTATATGCTTGGTATAGGGAATGGCACTATTAG
GAGAAGTGGNCTTGAATAAGGTGTGTCACTATAAGTGTGGCCTTATTACC
TTCATCTTACCTGTGAAGAAATTAGTCTTCCCCTATCAAGCTT

CCGCCCCAACCCCCGGGNNNNCCGGCCCNNCCACGCCACCACACACCCCC
CCGAAAACACCCACACAACCCCCACCACAAAAAAGAAAAGAAACCGACAA
ACACGAACANCAAAACCCCACGACACCCAACGACCCACCACGCACCCCCA
CCACACAAAACAAAAAAAAAAAACACAAAAACAAAAAAACCACAACCCCC
ACACACAACACCCCACAAACAACCCCCACACAACCCAAACCACAAACCAC
CCCCGACCACACACACACCAAACACCCCCCGCAAAGAACAAAAAAGCCCA
CAAAAAACCACAAAACCCCCCCCACCCNACAACCACAAAACACACAACAA
AAAAAAAAAAAAACAAAAAACAAAAAACCCAACCAACCAAGACAAAACCC
CCCACCCCACACACCCCCGCCCCCCACAACACCCCCCACCAAAAAANAAC
CCCACCACGAAAAAAAAAACAACCCCCNNNNNNNNNNNNGGANNNNNNNN
NNNNCCGAAAGCCAAGNGAAGNNAGNCCNGAGGCGGNCCGNCCNGGGNNN
GCCCGAANGGGGAGGNGGNANCNNNANGNNAGGNANNCCGNAGGNANNNA
CCAAGNCCCCANNNNGGGNNCCCNGGNNNAAGNNGNNNNAANGNNNCCCC
NAGNNAGCCCCCGGAGNGGAGCCCGNAGGCGCCCNNCCCCGGGGGGNANN
GGGNGAGCCCCNNCANCGGCCCCNAGGGGGGGAAAGGGGGGNNGGGCACC
CCNGGGGCGGCGCCCCGAAANNGGGCCCAGGGCCCCCCCAAGGGGGGGAG
CCCACCNGGGGGGNCCAACCCCCGGGCCCCCGGGGGGGGACT

Query= MSMg01no368_j06.b1 MSMg01no368_j06.b1 CHROMAT_FILE:
MSMg01no368_j06.b1 PHD_FILE: MSMg01no368_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:03 2005
         (538 letters)



>mm_chrX_122666941_122667878
          Length = 938

 Score =  841 bits (435), Expect = 0.0
 Identities = 513/541 (94%), Gaps = 4/541 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   ttggggcacctgtgaggaa----ttttttttcctgatttgattatgtgaaataggaagac 57
           |||||||||||||||||||    |||||||||||||||||||||||||| |||||||| |
Sbjct: 198 ttggggcacctgtgaggaattttttttttttcctgatttgattatgtgagataggaagtc 257

                                                                       
Query: 58  caaccccaaatctagatcgtttgttctgttgtagaaacaactctacaatataaatttcat 117
           ||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 258 caaccccaaatgtagatcgtttgttttgttatagaaacaactctacaatataaatttcat 317

                                                                       
Query: 118 tgatgttagttttttaataaaagtgtgtagctaggactaaattctagtagttacaatcaa 177
           ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 318 tgatgctagttttttaataaaagtgtgtagctaggactaaattctagtagtttcaatcaa 377

                                                                       
Query: 178 gattgtttttatgatcctgcactgtttctgtcttttattacagtgtttcctgaacactga 237
           ||| |||||||||||| |  ||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 378 gatcgtttttatgatcttatactgtttctgtcttttattacagtgttccctgagcactga 437

                                                                       
Query: 238 ggtggagatttgatggtgacctcccttgtaggactgaatgttagaaggtccctcaggctt 297
           || ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 438 gggggagatttgatggtgacctcctttgtgggactgaatgttagaaggtccctcaggctt 497

                                                                       
Query: 298 tgcatattatctggctgcaagtctctgtatttgtttccatctgctgcatgaggatacttc 357
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 498 tgcatattatctggctgcaattctctgtatttgtttccatctgctgcatgaggatacctc 557

                                                                       
Query: 358 tgtgatgatgaatgagcaagatacagacctgtgagtatagcaaaatgtcaacaggagtca 417
           ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct: 558 tgtgatgatgaatgagcaagatacagatctatgagtatagcaaaatgtcaacaggagtca 617

                                                                       
Query: 418 tttaactgctataatcctttagtagaatagtagtatttggtctttctctagatccctggc 477
           ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tttatttgctatactcctttagtagaatagtagtatttggtctttctctagatccctggc 677

                                                                       
Query: 478 atttctagtttcaggttcttggccattcaagcattgttgagtatggattccacttaatga 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 678 atttctagtttcaggttcttggccattcaagcattgttgagtatggattccactcaatga 737

            
Query: 538 t 538
           |
Sbjct: 738 t 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)