Query= MSMg01no368_j12.b1 MSMg01no368_j12.b1 CHROMAT_FILE:
MSMg01no368_j12.b1 PHD_FILE: MSMg01no368_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:04 2005
(589 letters)
>mm_chrX_161610832_161611820
Length = 989
Score = 1017 bits (526), Expect = 0.0
Identities = 548/556 (98%), Gaps = 5/556 (0%)
Strand = Plus / Minus
Query: 8 ttccttaattaaaagacaaagattgtcagataaaataaaagctcaaataaaattcgattc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttccttaattaaaagacaaagattgtcagataaaataaaagctcaaataaaattcgattc 494
Query: 68 cttcttgcctatgatagatacagttataagggcaatacagacacctaaaattaacattct 127
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cttcttgcctataatagatacagttataagggcaatacagacacctaaaattaacattct 434
Query: 128 caatccatctgtcatgatatcatgaaaatgctaatcaaataaagccagttcagggcctta 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caatccatctgtcatgatatcatgaaaatgctaatcaaataaagccagttcagggcctta 374
Query: 188 atatttaagaaagtag--tctctccaaatctgctactaaattcaggcatgtgcactacca 245
|||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atatttaagaaagtagaat-t-tccaaatctgctactaaattcaggcatgtgcactacca 316
Query: 246 acgataattccaacacttaagaagcccagatagaagatttctgtaaattctttaaagtct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 acgataattccaacacttaagaagcccagatagaagatttctgtaaattctttaaagtct 256
Query: 306 gctttggctacattgtgagttccaggccagcctaaactacaaaacatctacatataaaag 365
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 255 gctttggctacattgtgagttcccggccagcctaaactacaaaacatctacatataaaag 196
Query: 366 caaatacaaaaacctattatttatatgcagctaatagaatggtcttggatatataatgtt 425
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 195 caaatac-aaaacctattatttatatgcagctaatagaatggtcttggatatataatgat 137
Query: 426 tgattacattgccaaagaaaggcagataaacccatagtcatagtggtcaattttaatgta 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tgattacattgccaaagaaaggcagataaacccatagtcatagtggtcaattttaatgta 77
Query: 486 catctttcaataattaacaggaaaaatattaaaagaacagtagagcgtaaacttatcaac 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 catctttcaataattaacaggaaaaatattaaaagaacagtagagcgtaaacttatcaac 17
Query: 546 aggattaataaactca 561
||||||||||||||||
Sbjct: 16 aggattaataaactca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_j12.g1 MSMg01no368_j12.g1 CHROMAT_FILE:
MSMg01no368_j12.g1 PHD_FILE: MSMg01no368_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:04 2005
(515 letters)
>mm_chrX_161587673_161588587
Length = 915
Score = 946 bits (489), Expect = 0.0
Identities = 508/515 (98%)
Strand = Plus / Plus
Query: 1 ctggatactagagataggcaagcgtttaacaatttgttggagataccaaatagcttatag 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggatactagagataggcaagtgtttaacaatttgttggagataccaaatagcttatag 260
Query: 61 gaatatatggctatgtagttttcatttgtgaaacattaactataagtgagggtcattaaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatatatgactatgtagttttcatttgtgaaacattaactataagtgagggtcattaaa 320
Query: 121 atcagaaatctaagagaggaagccatgatggaagtctaggaaagacatattaaactcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcagaaatctaagagaggaagccatgatggaagtctaggaaagacatattaaactcagc 380
Query: 181 tatatacatctcttaactccccaaattgtctaatcattctgattgaattttaataaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatatacatctcttaactccccaaattgtctaatcattctgattgaattttaataaactt 440
Query: 241 gctccaatacaatctactccacacaatagttcagttgtcctataatttttgcaaagaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctccaatacaatctactccacacaatagttcagttgtcctataatttttgcaaagaatc 500
Query: 301 taatataaaacttataagatatagggcatgaaaatttaaatctcctaaatagcagcacac 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 taatataaaacttataagatatagggcatgaaaatttaaatctcttaaatagcagcacac 560
Query: 361 aatctttcattaaataataaaaaaggaattgaattggctatacctcgagtgtctacaaaa 420
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatctttcattaaataataaagaaggaattgaattggctatacctcgagtgtctacaaaa 620
Query: 421 ccaaatacatggaaacctagaaacagtaataggaccttcttnaaacccatttcttttctt 480
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 621 ccaaatacatggaaacctagaaacagtaataggaccttcttaaaacccatttctttcctt 680
Query: 481 cttctattgctcagcttctgctacnagttgctcag 515
|||||||||||||||||||||||| ||||||||||
Sbjct: 681 cttctattgctcagcttctgctacaagttgctcag 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
