Query= MSMg01no368_o02.b1 MSMg01no368_o02.b1 CHROMAT_FILE:
MSMg01no368_o02.b1 PHD_FILE: MSMg01no368_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:27 2005
(535 letters)
>mm_chrX_94724812_94725746
Length = 935
Score = 967 bits (500), Expect = 0.0
Identities = 522/530 (98%), Gaps = 2/530 (0%)
Strand = Plus / Plus
Query: 8 ttcctttgctttcaatcattttcttttctctgaattaaagatactgttttagtgtagcta 67
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttcctttgcttttaatcattttcttttctctgaattaaagatactgttttagtgtagcta 267
Query: 68 ttcactagggaataacatgtcatgacacttatgactgtgtggcacaaaatactgtgctca 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttcactagggaataacatgtcatgacacttatgactgtgtggcacaaaatactgtgctca 327
Query: 128 cctatagaacactggctatgtaatcatagcaataaaatcagaggaataactgagtgagaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 cctatagaacactggctatgtaatcatagcaataaaatcagaggaataactgagtgagaa 387
Query: 188 ctaaatctatggcaatggttatgttgcttttaacatttttgtagtagaaaaaaattcaga 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctaaatctatggcaatggttatgttgcttttaacatttttgtagtagaaaaaaattcaga 447
Query: 248 atagtcaataacactctgtgggattccacaacttctccttgcctctcaggtgtagatggt 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atagtcaataacactctgtgggattccacaacttctccttgcctctcaggtgtagatggt 507
Query: 308 ttagagatgttggagttaaaaggggaatgctaatggaggacaggtcttcagtgatgcagc 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ttagagatgttggagttaaaaggggaatgctaatggaggacaggtcttcagtgatgcagc 567
Query: 368 tccaccgacatagtcacccaaacatggatgaaactcctaacctggaatgtactcctaaac 427
| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tttaatgagatagtcacccaaacatggatgaaactcctaacctggaatgtactcctaaac 627
Query: 428 taaggccaacaaattcccaggctccctaagctaggctggaatggaatcattgttcttttt 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 taaggccaacaaattcccaggctccctaagctaggctggaatggaatcattgttcttttt 687
Query: 488 gtttttgtttttgttttgttgttgtttttgtttttt--gttttttgttgt 535
|||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 688 gtttttgtttttgttttgttgttgtttttgttttttttgttttttgttgt 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_o02.g1 MSMg01no368_o02.g1 CHROMAT_FILE:
MSMg01no368_o02.g1 PHD_FILE: MSMg01no368_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:27 2005
(624 letters)
>mm_chrX_94900502_94901525
Length = 1024
Score = 897 bits (464), Expect = 0.0
Identities = 476/480 (99%)
Strand = Plus / Minus
Query: 145 atatgtatcagcaaaggtgaaaaaaatgtattcctttcttgtctttttccttacatctac 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 atatgtatcagcaaaggtgaaaaaaatgtattcctttcttgtctttttccttacatctac 965
Query: 205 acttgtccatgtctaatacatcatactagaggaaatagaaacttctttatctagtagagg 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 acttgtccatgtctaatacatcatactagaggaaatagaaacttctttatctagtagagg 905
Query: 265 cacaagaagatacagatataaatagatatagatataatttatatgtatctatatttacaa 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 904 cacaagaagatacagatataaatagatatagatataatttatatgtatctatatttataa 845
Query: 325 tatatatctgtataattcgcacaattaaaacttctctgacatctaatgtataaaagtctt 384
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 tatatatctgtataatttgtacaattaaaacttctctgacatctaatgtataaaagtctt 785
Query: 385 tatgtatatatgtaactcatctcaataaatcaacagaatatttacataagttagttcctt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 tatgtatatatgtaactcatctcaataaatcaacagaatatttacataagttagttcctt 725
Query: 445 tctaagctattattaaactgagggctatagaaatgaaaagatagttaaccagagtcaaaa 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tctaagctattattaaactgagggctatagaaatgaaaagatagttaaccagagtcaaaa 665
Query: 505 agtaacctgtatttaagccaagatatttgtttattttatatcattagcatagttcattta 564
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 664 agtaacctgtatttaagccaagatatttatttattttatatcattagcatagttcattta 605
Query: 565 tacaaaattatgagtatcattatgaccattttatatatgcatatagtattctatgattca 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tacaaaattatgagtatcattatgaccattttatatatgcatatagtattctatgattca 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
