XXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCTCC
CCTTTCGCAATTCTCTTCAACAGGTGAATATTATTTATTAGGAGCTCAAA
TGCCATCTGGAAAATTTGCACATTTGGCATCATTCTTACCAAACATCATT
TGCCTGTTTCACTTTTACTTAAAGACATCATCTCATCATTCTGAAGAACA
CTTGCAACTTCCAACCAATACTCACAAGCTAGGAAGAATTAATATCCTTG
GTAAAGATAAGCAATATAGTTTTCATGCAATAATCATCATGTGTATTTCC
TTCTTCAAACAATTGATTTTTCCTATGACGAAGTTAAAGAATTTTTATAA
AACTTATCCAATGGGGATTGAAGAGATGGCTCAGCAGTTAAGAACTCTGA
CTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACTACATGGTGGAT
CACAACCATCTGTAATGGTATCTGATACCCTCAGATACATAAAATAAATA
AATTAATATTTTAAAATATTAAAAATGTATGTTATGACAGTTTGTTGAGT
GAAATTAGCTATAGAGTTAANAATATAAATAAGATTAATTTTCATATTGA
TACAGCGTTAGATGCCNGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGTT
TTTTGCCATGCTACAGATTGAACTGAGGGCCCCCTGTATTCTAGGCAAGC
ATTCTAACACTGAGGTATAATTTCCACCAAAATATTCTGAATGTTCTGCT
TTAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGCA
CTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAA
CAACCCTGAGATTCCACCTCACACCAGTCAGAATGACTAAGATCAAAAAT
TCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCT
CCATTGTTGGTGGGAGTGCAGGCTTGTACAACCATTCTGGAAATCAGTCT
GGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAATA
CCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGACAC
ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA
AAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTAC
ATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA
ATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAA
CACATTCTCCAAGAAACTCCACCATATGTATTTCCCTGATAGGGGATATT
ATCCCCCAAACTAGGGAACCCCAGAAATAAAGAAAAAATTTGTTTAACCC
CCGTAAACTCCCCATAAAAGAAAAAGTGAATGGGGGAACTAATGCCCCCC
CCCAAATTTTGAAAAAATAACC

Query= MSMg01no372_g18.b1 MSMg01no372_g18.b1 CHROMAT_FILE:
MSMg01no372_g18.b1 PHD_FILE: MSMg01no372_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:10 2005
         (616 letters)



>mm_chrX_16409058_16410073
          Length = 1016

 Score = 1077 bits (557), Expect = 0.0
 Identities = 592/604 (98%), Gaps = 1/604 (0%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattctcccctttcgcaattctcttcaacaggtgaatattatttattaggagctcaaat 66
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctccccagacgcaattctcttcaacaggtgaatattatttattaggagctcaaat 266

                                                                       
Query: 67  gccatctggaaaatttgcacatttggcatcattcttaccaaacatcatttgcctgtttca 126
           |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 267 gccatctggaaaatttgcacatttggcatcattcttaccaaacaccgtttgcctgtttca 326

                                                                       
Query: 127 cttttacttaaagacatcatctcatcattctgaagaacacttgcaacttccaaccaatac 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cttttacttaaagacatcatctcatcattctgaagaacacttgcaacttccaaccaatac 386

                                                                       
Query: 187 tcacaagctaggaagaattaatatccttggtaaagataagcaatatagttttcatgcaat 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tcacaagctaggaagaattaatatccttggtaaagataagcaatatagttttcatgcaat 446

                                                                       
Query: 247 aatcatcatgtgtatttccttcttcaaacaattgatttttcctatgacgaagttaaagaa 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 447 aatcatcatgtgtatttccttcttcaaacaattgatttttcctatgacgaagttaaataa 506

                                                                       
Query: 307 tttttataaaacttatccaatggggattgaagagatggctcagcagttaagaactctgac 366
           ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 507 tttttataaaacttatccaatggagattgaagagatggctcagcagtcaagaactctgac 566

                                                                       
Query: 367 tgttcttccagaggtcctgagttcaattcccagcaactacatggtggatcacaaccatct 426
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 567 tgttcttccagaggtcctgagttcaattcccagcaactacatggtagatcacaaccatct 626

                                                                       
Query: 427 gtaatggtatctgataccctcagatacataaaataaataaattaatattttaaaatatta 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtaatggtatctgataccctcagatacataaaataaataaattaatattttaaaatatta 686

                                                                       
Query: 487 aaaatgtatgttatgacagtttgttgagtgaaattagctatagagttaanaatataaata 546
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 687 aaaatgtatgttatgacagtttgttgagtgaaattagctatagagttaa-aatataaata 745

                                                                       
Query: 547 agattaattttcatattgatacagcgttagatgccngagagagagagagagagagagaga 606
           ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 746 agattaattttcatattgatacagcgttagatgccagagaaagagagagagagagagaga 805

               
Query: 607 gaga 610
           ||||
Sbjct: 806 gaga 809


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)