Query= MSMg01no374_c10.b1 MSMg01no374_c10.b1 CHROMAT_FILE:
MSMg01no374_c10.b1 PHD_FILE: MSMg01no374_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:17 2005
(421 letters)
>mm_chrX_57823423_57824244
Length = 822
Score = 772 bits (399), Expect = 0.0
Identities = 414/421 (98%), Gaps = 5/421 (1%)
Strand = Plus / Plus
Query: 4 ggaattctgttaaa---tttaccaataaatatctctcaaagtgagagctcctgcggcctc 60
|||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgttaaagcat--agcaataaatatctctcaaagtgagagctcctgcggcctc 261
Query: 61 ctctcctgtaatgacagaaaagatgtttcctccataattgtgggtagtgaaaagcaaagt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 ctctcctgtaatgacagaaaagatgtttcctctataattgtgggtagtgaaaagcaaagt 321
Query: 121 tggtttgcacaaaactagctacttctctggcagactgcagatatgtgcaggttgttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggtttgcacaaaactagctacttctctggcagactgcagatatgtgcaggttgttggtg 381
Query: 181 gggtggggggcaaggaatgaaatagagagacgtttgtactgtggagggcaggggaagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggtggggggcaaggaatgaaatagagagacgtttgtactgtggagggcaggggaagaca 441
Query: 241 aggattaatggtgagcagaattgtattttagtgaatgctgctaacaacagagctatgggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aggattaatggtgagcagaattgtattttagtgaatgctgctaacaacagagctatgggg 501
Query: 301 caagagggtgaaacaggggtgggagagggaatgtggagggctgtgaatgggtaagtgaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 caagagggtgaaacaggggtgggagagggaatgtggagggctgtgaatgggtaagtgaga 561
Query: 361 gcactatgtcaaggcagggagtgaatagataatttatgtgtatttacaaaagtacaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gcactatgtcaaggcagggagtgaatagataatttatgtgtatttacaaaagtacaagca 621
Query: 421 a 421
|
Sbjct: 622 a 622
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 822
Length adjustment: 9
Effective length of query: 412
Effective length of database: 813
Effective search space: 334956
Effective search space used: 334956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_c10.g1 MSMg01no374_c10.g1 CHROMAT_FILE:
MSMg01no374_c10.g1 PHD_FILE: MSMg01no374_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:17 2005
(489 letters)
>mm_chrX_58003025_58003912
Length = 888
Score = 938 bits (485), Expect = 0.0
Identities = 488/489 (99%), Gaps = 1/489 (0%)
Strand = Plus / Minus
Query: 1 aacgcctgccatgctccagccctaacataatgtgaattttttcctttttttttttcaaat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 688 aacgcctgccatgctccagccctaacataatgtgaattttttcc-ttttttttttcaaat 630
Query: 61 tatgaactgacagtcgtgcttgcatgaacaacaaactattaagtcccagcatacatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tatgaactgacagtcgtgcttgcatgaacaacaaactattaagtcccagcatacatgcag 570
Query: 121 agtttactgttctaatcacaaataaaactgacaacaaagttaatctgacacatatttaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 agtttactgttctaatcacaaataaaactgacaacaaagttaatctgacacatatttaat 510
Query: 181 gatatacctaatggttattgtgttgggtggtaattagtcataaatggtaagcagttcgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gatatacctaatggttattgtgttgggtggtaattagtcataaatggtaagcagttcgca 450
Query: 241 taaatgattgtaattagtattacttttccacacccagaccaatttttctagtttcctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 taaatgattgtaattagtattacttttccacacccagaccaatttttctagtttcctttc 390
Query: 301 ttactattagttcctcagcatccctaatcagcatcagtgctgataattttcgctgatacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttactattagttcctcagcatccctaatcagcatcagtgctgataattttcgctgatacc 330
Query: 361 atgtaccatttaatcatcagcatcacatacatgcacacactcttccatacattatgagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 atgtaccatttaatcatcagcatcacatacatgcacacactcttccatacattatgagac 270
Query: 421 aaaaggtcctggctcttcctctccagcagctgaggttttgttgttccccacccccactgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 aaaaggtcctggctcttcctctccagcagctgaggttttgttgttccccacccccactgc 210
Query: 481 ctcctagtg 489
|||||||||
Sbjct: 209 ctcctagtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space: 420562
Effective search space used: 420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
